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2dt4

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[[Image:2dt4.jpg|left|200px]]
 
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==Crystal structure of Pyrococcus horikoshii a plant- and prokaryote-conserved (PPC) protein at 1.60 resolution==
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The line below this paragraph, containing "STRUCTURE_2dt4", creates the "Structure Box" on the page.
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<StructureSection load='2dt4' size='340' side='right'caption='[[2dt4]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2dt4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DT4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DT4 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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{{STRUCTURE_2dt4| PDB=2dt4 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dt4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dt4 OCA], [https://pdbe.org/2dt4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dt4 RCSB], [https://www.ebi.ac.uk/pdbsum/2dt4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dt4 ProSAT]</span></td></tr>
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</table>
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'''Crystal structure of Pyrococcus horikoshii a plant- and prokaryote-conserved (PPC) protein at 1.60 resolution'''
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== Function ==
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[https://www.uniprot.org/uniprot/O58532_PYRHO O58532_PYRHO]
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== Evolutionary Conservation ==
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==About this Structure==
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[[Image:Consurf_key_small.gif|200px|right]]
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2DT4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DT4 OCA].
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Check<jmol>
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<jmolCheckbox>
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==Reference==
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dt/2dt4_consurf.spt"</scriptWhenChecked>
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Crystal structure of Pyrococcus horikoshii PPC protein at 1.60 A resolution., Lin L, Nakano H, Nakamura S, Uchiyama S, Fujimoto S, Matsunaga S, Kobayashi Y, Ohkubo T, Fukui K, Proteins. 2007 May 1;67(2):505-7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17295322 17295322]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dt4 ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii]]
[[Category: Pyrococcus horikoshii]]
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[[Category: Single protein]]
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[[Category: Fujimoto S]]
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[[Category: Fujimoto, S.]]
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[[Category: Lin L]]
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[[Category: Lin, L.]]
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[[Category: Matsunaga S]]
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[[Category: Matsunaga, S.]]
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[[Category: Nakamura S]]
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[[Category: Nakamura, S.]]
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[[Category: Nakano H]]
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[[Category: Nakano, H.]]
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[[Category: Uchiyama S]]
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[[Category: Uchiyama, S.]]
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[[Category: Ppc domain]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 01:16:20 2008''
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Current revision

Crystal structure of Pyrococcus horikoshii a plant- and prokaryote-conserved (PPC) protein at 1.60 resolution

PDB ID 2dt4

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