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2epl

From Proteopedia

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{{Seed}}
 
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[[Image:2epl.png|left|200px]]
 
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<!--
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==N-acetyl-B-D-glucosaminidase (GCNA) from Streptococcus gordonii==
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The line below this paragraph, containing "STRUCTURE_2epl", creates the "Structure Box" on the page.
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<StructureSection load='2epl' size='340' side='right'caption='[[2epl]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2epl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_gordonii Streptococcus gordonii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EPL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EPL FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_2epl| PDB=2epl | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2epl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2epl OCA], [https://pdbe.org/2epl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2epl RCSB], [https://www.ebi.ac.uk/pdbsum/2epl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2epl ProSAT]</span></td></tr>
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</table>
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===N-acetyl-B-D-glucosaminidase (GCNA) from Streptococcus gordonii===
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== Function ==
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[https://www.uniprot.org/uniprot/Q6ST21_STRGN Q6ST21_STRGN]
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== Evolutionary Conservation ==
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<!--
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_18237743}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 18237743 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ep/2epl_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_18237743}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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2EPL is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_gordonii Streptococcus gordonii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EPL OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2epl ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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Structure of N-acetyl-beta-D-glucosaminidase (GcnA) from the endocarditis pathogen Streptococcus gordonii and its complex with the mechanism-based inhibitor NAG-thiazoline., Langley DB, Harty DW, Jacques NA, Hunter N, Guss JM, Collyer CA, J Mol Biol. 2008 Mar 14;377(1):104-16. Epub 2007 Sep 16. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18237743 18237743]
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</StructureSection>
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[[Category: Beta-N-acetylhexosaminidase]]
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[[Category: Large Structures]]
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[[Category: Single protein]]
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[[Category: Streptococcus gordonii]]
[[Category: Streptococcus gordonii]]
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[[Category: Collyer, C A.]]
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[[Category: Collyer CA]]
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[[Category: Guss, J M.]]
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[[Category: Guss JM]]
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[[Category: Harty, D W.S.]]
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[[Category: Harty DWS]]
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[[Category: Langley, D B.]]
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[[Category: Langley DB]]
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[[Category: Family 20]]
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[[Category: Gcna]]
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[[Category: Glucosaminidase]]
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[[Category: Glycoside hydrolase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 12:35:18 2008''
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Current revision

N-acetyl-B-D-glucosaminidase (GCNA) from Streptococcus gordonii

PDB ID 2epl

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