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2ext

From Proteopedia

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{{Seed}}
 
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[[Image:2ext.png|left|200px]]
 
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==TRAP4 (engineered TRAP)==
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The line below this paragraph, containing "STRUCTURE_2ext", creates the "Structure Box" on the page.
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<StructureSection load='2ext' size='340' side='right'caption='[[2ext]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2ext]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EXT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EXT FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TRP:TRYPTOPHAN'>TRP</scene></td></tr>
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{{STRUCTURE_2ext| PDB=2ext | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ext FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ext OCA], [https://pdbe.org/2ext PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ext RCSB], [https://www.ebi.ac.uk/pdbsum/2ext PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ext ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/MTRB_GEOSE MTRB_GEOSE]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ex/2ext_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ext ConSurf].
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<div style="clear:both"></div>
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===TRAP4 (engineered TRAP)===
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==See Also==
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*[[Tryptophan RNA-binding attenuation protein|Tryptophan RNA-binding attenuation protein]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_16698553}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 16698553 is the PubMed ID number.
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{{ABSTRACT_PUBMED_16698553}}
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==About this Structure==
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2EXT is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EXT OCA].
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==Reference==
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Rounding up: Engineering 12-membered rings from the cyclic 11-mer TRAP., Heddle JG, Yokoyama T, Yamashita I, Park SY, Tame JR, Structure. 2006 May;14(5):925-33. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16698553 16698553]
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[[Category: Geobacillus stearothermophilus]]
[[Category: Geobacillus stearothermophilus]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Heddle, J G.]]
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[[Category: Heddle JG]]
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[[Category: Park, S Y.]]
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[[Category: Park SY]]
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[[Category: Tame, J R.H.]]
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[[Category: Tame JRH]]
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[[Category: Yamashita, I.]]
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[[Category: Yamashita I]]
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[[Category: Yokoyama, T.]]
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[[Category: Yokoyama T]]
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[[Category: 12-mer]]
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[[Category: Artificial]]
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[[Category: Engineered]]
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[[Category: Ring protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 04:21:35 2008''
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Current revision

TRAP4 (engineered TRAP)

PDB ID 2ext

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