This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2z3b
From Proteopedia
(Difference between revisions)
m (Protected "2z3b" [edit=sysop:move=sysop]) |
|||
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2z3b.png|left|200px]] | ||
| - | + | ==Crystal Structure of Bacillus Subtilis CodW, a non-canonical HslV-like peptidase with an impaired catalytic apparatus== | |
| - | + | <StructureSection load='2z3b' size='340' side='right'caption='[[2z3b]], [[Resolution|resolution]] 2.50Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2z3b]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z3B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z3B FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> | |
| - | == | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
| - | [[2z3b]] is a 12 chain structure with sequence from [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z3b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z3b OCA], [https://pdbe.org/2z3b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z3b RCSB], [https://www.ebi.ac.uk/pdbsum/2z3b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z3b ProSAT]</span></td></tr> |
| - | + | </table> | |
| - | == | + | == Function == |
| - | < | + | [https://www.uniprot.org/uniprot/CLPQ_BACSU CLPQ_BACSU] Protease subunit of a proteasome-like degradation complex.<ref>PMID:11179218</ref> |
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z3/2z3b_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2z3b ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Bacillus subtilis]] | [[Category: Bacillus subtilis]] | ||
| - | [[Category: Chung | + | [[Category: Large Structures]] |
| - | [[Category: Eom | + | [[Category: Chung CH]] |
| - | [[Category: Kang | + | [[Category: Eom SH]] |
| - | [[Category: Kang | + | [[Category: Kang GB]] |
| - | [[Category: Lim | + | [[Category: Kang MS]] |
| - | [[Category: Lim | + | [[Category: Lim BK]] |
| - | [[Category: Park | + | [[Category: Lim YJ]] |
| - | [[Category: Rho | + | [[Category: Park HH]] |
| - | [[Category: Seong | + | [[Category: Rho SH]] |
| - | [[Category: Wang | + | [[Category: Seong IS]] |
| - | + | [[Category: Wang J]] | |
| - | + | ||
Current revision
Crystal Structure of Bacillus Subtilis CodW, a non-canonical HslV-like peptidase with an impaired catalytic apparatus
| |||||||||||
Categories: Bacillus subtilis | Large Structures | Chung CH | Eom SH | Kang GB | Kang MS | Lim BK | Lim YJ | Park HH | Rho SH | Seong IS | Wang J

