This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3a5x

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3a5x" [edit=sysop:move=sysop])
Current revision (13:59, 13 March 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3a5x.png|left|200px]]
 
-
<!--
+
==L-type straight flagellar filament made of full-length flagellin==
-
The line below this paragraph, containing "STRUCTURE_3a5x", creates the "Structure Box" on the page.
+
<SX load='3a5x' size='340' side='right' viewer='molstar' caption='[[3a5x]], [[Resolution|resolution]] 4.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3a5x]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A5X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A5X FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a5x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a5x OCA], [https://pdbe.org/3a5x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a5x RCSB], [https://www.ebi.ac.uk/pdbsum/3a5x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a5x ProSAT]</span></td></tr>
-
{{STRUCTURE_3a5x| PDB=3a5x | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/FLIC_SALTY FLIC_SALTY] Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a5/3a5x_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3a5x ConSurf].
 +
<div style="clear:both"></div>
-
===L-type straight flagellar filament made of full-length flagellin===
+
==See Also==
-
 
+
*[[Flagellin 3D structures|Flagellin 3D structures]]
-
 
+
__TOC__
-
<!--
+
</SX>
-
The line below this paragraph, {{ABSTRACT_PUBMED_11268201}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 11268201 is the PubMed ID number.
+
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
-
-->
+
[[Category: Maki-Yonekura S]]
-
{{ABSTRACT_PUBMED_11268201}}
+
[[Category: Namba K]]
-
 
+
[[Category: Yonekura K]]
-
==About this Structure==
+
-
[[3a5x]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A5X OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:11268201</ref><ref group="xtra">PMID:12904785</ref><references group="xtra"/>
+
-
[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
+
-
[[Category: Maki-Yonekura, S.]]
+
-
[[Category: Namba, K.]]
+
-
[[Category: Yonekura, K.]]
+
-
[[Category: Bacterial flagellum]]
+
-
[[Category: Flagellar filament]]
+
-
[[Category: Flagellin]]
+
-
[[Category: Helical reconstruction]]
+
-
[[Category: Motor protein]]
+
-
[[Category: Secreted]]
+
-
[[Category: Structural protein]]
+

Current revision

L-type straight flagellar filament made of full-length flagellin

3a5x, resolution 4.00Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools