This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3a9u

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:00, 13 March 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3a9u.jpg|left|200px]]
 
-
<!--
+
==Crystal structures and enzymatic mechanisms of a Populus tomentosa 4-coumarate--CoA ligase==
-
The line below this paragraph, containing "STRUCTURE_3a9u", creates the "Structure Box" on the page.
+
<StructureSection load='3a9u' size='340' side='right'caption='[[3a9u]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3a9u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Populus_tomentosa Populus tomentosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A9U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A9U FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a9u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a9u OCA], [https://pdbe.org/3a9u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a9u RCSB], [https://www.ebi.ac.uk/pdbsum/3a9u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a9u ProSAT]</span></td></tr>
-
{{STRUCTURE_3a9u| PDB=3a9u | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structures and enzymatic mechanisms of a Populus tomentosa 4-coumarate--CoA ligase===
+
[https://www.uniprot.org/uniprot/Q941M3_POPTO Q941M3_POPTO]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
3A9U is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Populus_tomentosa Populus tomentosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A9U OCA].
+
<jmolCheckbox>
-
[[Category: 4-coumarate--CoA ligase]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a9/3a9u_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3a9u ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Populus tomentosa]]
[[Category: Populus tomentosa]]
-
[[Category: Hu, Y.]]
+
[[Category: Hu Y]]
-
[[Category: 4-coumarate--coa ligase]]
+
-
[[Category: Enzymatic mechanism]]
+
-
[[Category: Ligase]]
+
-
[[Category: Phenylpropanoid pathway]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Sep 10 13:55:17 2010''
+

Current revision

Crystal structures and enzymatic mechanisms of a Populus tomentosa 4-coumarate--CoA ligase

PDB ID 3a9u

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools