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3c5q

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Current revision (14:04, 13 March 2024) (edit) (undo)
 
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<StructureSection load='3c5q' size='340' side='right'caption='[[3c5q]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='3c5q' size='340' side='right'caption='[[3c5q]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3c5q]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C5Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C5Q FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3c5q]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_SS1 Helicobacter pylori SS1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C5Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C5Q FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=LYS:LYSINE'>LYS</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2qgh|2qgh]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=LYS:LYSINE'>LYS</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lysA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=210 Helicobacter pylori])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Diaminopimelate_decarboxylase Diaminopimelate decarboxylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.20 4.1.1.20] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c5q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c5q OCA], [https://pdbe.org/3c5q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c5q RCSB], [https://www.ebi.ac.uk/pdbsum/3c5q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c5q ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c5q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c5q OCA], [https://pdbe.org/3c5q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c5q RCSB], [https://www.ebi.ac.uk/pdbsum/3c5q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c5q ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/DCDA_HELPX DCDA_HELPX]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Diaminopimelate decarboxylase]]
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[[Category: Helicobacter pylori SS1]]
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[[Category: Helicobacter pylori]]
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[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Hu, T]]
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[[Category: Hu T]]
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[[Category: Jiang, H]]
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[[Category: Jiang H]]
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[[Category: Shen, X]]
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[[Category: Shen X]]
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[[Category: Wu, D]]
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[[Category: Wu D]]
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[[Category: Lyase]]
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Current revision

Crystal structure of diaminopimelate decarboxylase (I148L mutant) from Helicobacter pylori complexed with L-lysine

PDB ID 3c5q

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