This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ma7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:05, 13 March 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3ma7.png|left|200px]]
 
-
{{STRUCTURE_3ma7| PDB=3ma7 | SCENE= }}
+
==Crystal structure of Cardiolipin bound to mouse CD1D==
-
 
+
<StructureSection load='3ma7' size='340' side='right'caption='[[3ma7]], [[Resolution|resolution]] 2.29&Aring;' scene=''>
-
===Crystal structure of Cardiolipin bound to mouse CD1D===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3ma7]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MA7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MA7 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_21389252}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.29&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD4:(2R,5R,11R,14R)-5,8,11-TRIHYDROXY-5,11-DIOXIDO-17-OXO-2,14-BIS(TETRADECANOYLOXY)-4,6,10,12,16-PENTAOXA-5,11-DIPHOSPHATRIACONT-1-YL+TETRADECANOATE'>CD4</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ma7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ma7 OCA], [https://pdbe.org/3ma7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ma7 RCSB], [https://www.ebi.ac.uk/pdbsum/3ma7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ma7 ProSAT]</span></td></tr>
-
[[3ma7]] is a 4 chain structure of [[Beta-2 microglobulin]] with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [http://en.wikipedia.org/wiki/Spodoptera_frugiperda Spodoptera frugiperda]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MA7 OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CD1D1_MOUSE CD1D1_MOUSE] Antigen-presenting protein that binds self and non-self glycolipids and presents them to T-cell receptors on natural killer T-cells.<ref>PMID:11754812</ref> <ref>PMID:16314439</ref> <ref>PMID:16007091</ref>
==See Also==
==See Also==
-
*[[Beta-2 microglobulin|Beta-2 microglobulin]]
+
*[[Beta-2 microglobulin 3D structures|Beta-2 microglobulin 3D structures]]
-
 
+
*[[CD1|CD1]]
-
==Reference==
+
== References ==
-
<ref group="xtra">PMID:021389252</ref><references group="xtra"/>
+
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Spodoptera frugiperda]]
+
[[Category: Zajonc DM]]
-
[[Category: Zajonc, D M.]]
+
-
[[Category: Cd1]]
+
-
[[Category: Cell membrane]]
+
-
[[Category: Disulfide bond]]
+
-
[[Category: Endosome]]
+
-
[[Category: Gamma delta t cell]]
+
-
[[Category: Glycolipid presentation]]
+
-
[[Category: Glycoprotein]]
+
-
[[Category: Immune response]]
+
-
[[Category: Immune system]]
+
-
[[Category: Immunity]]
+
-
[[Category: Immunoglobulin domain]]
+
-
[[Category: Innate immunity]]
+
-
[[Category: Lysosome]]
+
-
[[Category: Membrane]]
+
-
[[Category: Mhc]]
+
-
[[Category: Mhc i]]
+
-
[[Category: Secreted]]
+
-
[[Category: Transmembrane]]
+

Current revision

Crystal structure of Cardiolipin bound to mouse CD1D

PDB ID 3ma7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools