This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6bxv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:24, 13 March 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6bxv' size='340' side='right'caption='[[6bxv]], [[Resolution|resolution]] 1.10&Aring;' scene=''>
<StructureSection load='6bxv' size='340' side='right'caption='[[6bxv]], [[Resolution|resolution]] 1.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6bxv]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BXV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6BXV FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6bxv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BXV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6BXV FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6bxv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bxv OCA], [http://pdbe.org/6bxv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6bxv RCSB], [http://www.ebi.ac.uk/pdbsum/6bxv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6bxv ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.1&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6bxv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bxv OCA], [https://pdbe.org/6bxv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6bxv RCSB], [https://www.ebi.ac.uk/pdbsum/6bxv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6bxv ProSAT]</span></td></tr>
</table>
</table>
-
<div style="background-color:#fffaf0;">
+
== Disease ==
-
== Publication Abstract from PubMed ==
+
[https://www.uniprot.org/uniprot/FUS_HUMAN FUS_HUMAN] Frontotemporal dementia with motor neuron disease;Hereditary essential tremor;Amyotrophic lateral sclerosis;Juvenile amyotrophic lateral sclerosis;Myxofibrosarcoma;Myxoid/round cell liposarcoma. A chromosomal aberration involving FUS is found in a patient with malignant myxoid liposarcoma. Translocation t(12;16)(q13;p11) with DDIT3. A chromosomal aberration involving FUS is a cause of acute myeloid leukemia (AML). Translocation t(16;21)(p11;q22) with ERG. The disease may be caused by mutations affecting the gene represented in this entry. A chromosomal aberration involving FUS is found in a patient with angiomatoid fibrous histiocytoma. Translocation t(12;16)(q13;p11.2) with ATF1 generates a chimeric FUS/ATF1 protein. The disease is caused by mutations affecting the gene represented in this entry. The disease is caused by mutations affecting the gene represented in this entry.
-
Subcellular membraneless assemblies are a reinvigorated area of study in biology, with spirited scientific discussions on the forces between the low-complexity protein domains within these assemblies. To illuminate these forces, we determined the atomic structures of five segments from protein low-complexity domains associated with membraneless assemblies. Their common structural feature is the stacking of segments into kinked beta sheets that pair into protofilaments. Unlike steric zippers of amyloid fibrils, the kinked sheets interact weakly through polar atoms and aromatic side chains. By computationally threading the human proteome on our kinked structures, we identified hundreds of low-complexity segments potentially capable of forming such interactions. These segments are found in proteins as diverse as RNA binders, nuclear pore proteins, and keratins, which are known to form networks and localize to membraneless assemblies.
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/FUS_HUMAN FUS_HUMAN] Binds both single-stranded and double-stranded DNA and promotes ATP-independent annealing of complementary single-stranded DNAs and D-loop formation in superhelical double-stranded DNA. May play a role in maintenance of genomic integrity.
-
Atomic structures of low-complexity protein segments reveal kinked beta sheets that assemble networks.,Hughes MP, Sawaya MR, Boyer DR, Goldschmidt L, Rodriguez JA, Cascio D, Chong L, Gonen T, Eisenberg DS Science. 2018 Feb 9;359(6376):698-701. doi: 10.1126/science.aan6398. PMID:29439243<ref>PMID:29439243</ref>
+
-
 
+
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+
-
</div>
+
-
<div class="pdbe-citations 6bxv" style="background-color:#fffaf0;"></div>
+
-
== References ==
+
-
<references/>
+
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Cascio, D]]
+
[[Category: Cascio D]]
-
[[Category: Eisenberg, D S]]
+
[[Category: Eisenberg DS]]
-
[[Category: Gonen, T]]
+
[[Category: Gonen T]]
-
[[Category: Hughes, M P]]
+
[[Category: Hughes MP]]
-
[[Category: Rodriguez, J A]]
+
[[Category: Rodriguez JA]]
-
[[Category: Sawaya, M R]]
+
[[Category: Sawaya MR]]
-
[[Category: Amyloid]]
+
-
[[Category: Lark]]
+
-
[[Category: Low-complexity]]
+
-
[[Category: Protein fibril]]
+
-
[[Category: Reversible-amyloid]]
+

Current revision

SYSSYGQS from low-complexity domain of FUS, residues 54-61

PDB ID 6bxv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/6bxv"
Personal tools