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6clq
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==1.21 A MicroED structure of GSNQNNF at 2.8 e- / A^2== | ==1.21 A MicroED structure of GSNQNNF at 2.8 e- / A^2== | ||
| - | <StructureSection load='6clq' size='340' side='right' caption='[[6clq]], [[Resolution|resolution]] 1.21Å' scene=''> | + | <StructureSection load='6clq' size='340' side='right'caption='[[6clq]], [[Resolution|resolution]] 1.21Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[6clq]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CLQ OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[6clq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CLQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6CLQ FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron crystallography, [[Resolution|Resolution]] 1.21Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6clq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6clq OCA], [https://pdbe.org/6clq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6clq RCSB], [https://www.ebi.ac.uk/pdbsum/6clq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6clq ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| - | <div style="background-color:#fffaf0;"> | ||
| - | == Publication Abstract from PubMed == | ||
| - | Micro-crystal electron diffraction (MicroED) combines the efficiency of electron scattering with diffraction to allow structure determination from nano-sized crystalline samples in cryoelectron microscopy (cryo-EM). It has been used to solve structures of a diverse set of biomolecules and materials, in some cases to sub-atomic resolution. However, little is known about the damaging effects of the electron beam on samples during such measurements. We assess global and site-specific damage from electron radiation on nanocrystals of proteinase K and of a prion hepta-peptide and find that the dynamics of electron-induced damage follow well-established trends observed in X-ray crystallography. Metal ions are perturbed, disulfide bonds are broken, and acidic side chains are decarboxylated while the diffracted intensities decay exponentially with increasing exposure. A better understanding of radiation damage in MicroED improves our assessment and processing of all types of cryo-EM data. | ||
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| - | Analysis of Global and Site-Specific Radiation Damage in Cryo-EM.,Hattne J, Shi D, Glynn C, Zee CT, Gallagher-Jones M, Martynowycz MW, Rodriguez JA, Gonen T Structure. 2018 May 1;26(5):759-766.e4. doi: 10.1016/j.str.2018.03.021. Epub 2018, Apr 26. PMID:29706530<ref>PMID:29706530</ref> | ||
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| - | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| - | </div> | ||
| - | <div class="pdbe-citations 6clq" style="background-color:#fffaf0;"></div> | ||
| - | == References == | ||
| - | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Gallagher-Jones | + | [[Category: Large Structures]] |
| - | [[Category: Glynn | + | [[Category: Synthetic construct]] |
| - | [[Category: Gonen | + | [[Category: Gallagher-Jones M]] |
| - | [[Category: Hattne | + | [[Category: Glynn C]] |
| - | [[Category: Martynowycz | + | [[Category: Gonen T]] |
| - | [[Category: Rodriguez | + | [[Category: Hattne J]] |
| - | [[Category: Shi | + | [[Category: Martynowycz MW]] |
| - | [[Category: Zee | + | [[Category: Rodriguez JA]] |
| - | + | [[Category: Shi D]] | |
| - | + | [[Category: Zee C-T]] | |
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| - | + | ||
Current revision
1.21 A MicroED structure of GSNQNNF at 2.8 e- / A^2
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