This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6dhh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 6dhh is ON HOLD Authors: Description: Category: Unreleased Structures)
Current revision (14:34, 13 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6dhh is ON HOLD
+
==RT XFEL structure of Photosystem II 400 microseconds after the second illumination at 2.2 Angstrom resolution==
 +
<StructureSection load='6dhh' size='340' side='right'caption='[[6dhh]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6dhh]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermosynechococcus_vestitus_BP-1 Thermosynechococcus vestitus BP-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DHH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6DHH FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCR:BETA-CAROTENE'>BCR</scene>, <scene name='pdbligand=BCT:BICARBONATE+ION'>BCT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CLA:CHLOROPHYLL+A'>CLA</scene>, <scene name='pdbligand=DGD:DIGALACTOSYL+DIACYL+GLYCEROL+(DGDG)'>DGD</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE'>LHG</scene>, <scene name='pdbligand=LMG:1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE'>LMG</scene>, <scene name='pdbligand=OEY:CA-MN4-O6+CLUSTER'>OEY</scene>, <scene name='pdbligand=PHO:PHEOPHYTIN+A'>PHO</scene>, <scene name='pdbligand=PL9:2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE'>PL9</scene>, <scene name='pdbligand=SQD:1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL'>SQD</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6dhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dhh OCA], [https://pdbe.org/6dhh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6dhh RCSB], [https://www.ebi.ac.uk/pdbsum/6dhh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6dhh ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PSBA1_THEVB PSBA1_THEVB] Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.[HAMAP-Rule:MF_01379]<ref>PMID:20558739</ref> <ref>PMID:21367867</ref> <ref>PMID:25006873</ref>
-
Authors:
+
==See Also==
-
 
+
*[[Photosystem II 3D structures|Photosystem II 3D structures]]
-
Description:
+
== References ==
-
[[Category: Unreleased Structures]]
+
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Thermosynechococcus vestitus BP-1]]
 +
[[Category: Adams PD]]
 +
[[Category: Aller P]]
 +
[[Category: Alonso-Mori R]]
 +
[[Category: Batyuk A]]
 +
[[Category: Bergmann U]]
 +
[[Category: Boutet S]]
 +
[[Category: Brewster AS]]
 +
[[Category: Butryn A]]
 +
[[Category: Carbajo S]]
 +
[[Category: Chatterjee R]]
 +
[[Category: Cheah MH]]
 +
[[Category: Dobbek H]]
 +
[[Category: Douthit L]]
 +
[[Category: Fransson T]]
 +
[[Category: Fuller FD]]
 +
[[Category: Gul S]]
 +
[[Category: Holton JM]]
 +
[[Category: Hussein R]]
 +
[[Category: Ibrahim M]]
 +
[[Category: Kern J]]
 +
[[Category: Koglin JE]]
 +
[[Category: Kroll T]]
 +
[[Category: Lassalle L]]
 +
[[Category: Liang M]]
 +
[[Category: Messinger J]]
 +
[[Category: Moriarty NW]]
 +
[[Category: Orville AM]]
 +
[[Category: Pastor E]]
 +
[[Category: Sauter NK]]
 +
[[Category: Seufert I]]
 +
[[Category: Shevela D]]
 +
[[Category: Sierra RG]]
 +
[[Category: Sokaras D]]
 +
[[Category: Weninger C]]
 +
[[Category: Wersig J]]
 +
[[Category: Yachandra VK]]
 +
[[Category: Yano J]]
 +
[[Category: Young ID]]
 +
[[Category: Zhang M]]
 +
[[Category: Zouni A]]
 +
[[Category: De Lichtenberg C]]

Current revision

RT XFEL structure of Photosystem II 400 microseconds after the second illumination at 2.2 Angstrom resolution

PDB ID 6dhh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/6dhh"
Personal tools