This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1ahm
From Proteopedia
(Difference between revisions)
| (8 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1ahm.png|left|200px]] | ||
| - | + | ==DER F 2, THE MAJOR MITE ALLERGEN FROM DERMATOPHAGOIDES FARINAE, NMR, 10 STRUCTURES== | |
| - | + | <StructureSection load='1ahm' size='340' side='right'caption='[[1ahm]]' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1ahm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Dermatophagoides_farinae Dermatophagoides farinae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AHM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AHM FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ahm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ahm OCA], [https://pdbe.org/1ahm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ahm RCSB], [https://www.ebi.ac.uk/pdbsum/1ahm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ahm ProSAT]</span></td></tr> | |
| - | == | + | </table> |
| - | [[1ahm]] is a 1 chain structure with sequence from [ | + | == Function == |
| - | + | [https://www.uniprot.org/uniprot/ALL2_DERFA ALL2_DERFA] | |
| - | == | + | == Evolutionary Conservation == |
| - | < | + | [[Image:Consurf_key_small.gif|200px|right]] |
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ah/1ahm_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ahm ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Dermatophagoides farinae]] | [[Category: Dermatophagoides farinae]] | ||
| - | [[Category: Hatanaka | + | [[Category: Large Structures]] |
| - | [[Category: Ichikawa | + | [[Category: Hatanaka H]] |
| - | [[Category: Inagaki | + | [[Category: Ichikawa S]] |
| - | [[Category: Iwamoto | + | [[Category: Inagaki F]] |
| - | [[Category: Ogura | + | [[Category: Iwamoto N]] |
| - | [[Category: Okumura | + | [[Category: Ogura K]] |
| - | [[Category: Yuuki | + | [[Category: Okumura Y]] |
| - | + | [[Category: Yuuki T]] | |
| - | + | ||
Current revision
DER F 2, THE MAJOR MITE ALLERGEN FROM DERMATOPHAGOIDES FARINAE, NMR, 10 STRUCTURES
| |||||||||||
