This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1atb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:28, 13 March 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1atb.png|left|200px]]
 
-
<!--
+
==HIGH-RESOLUTION STRUCTURE OF ASCARIS TRYPSIN INHIBITOR IN SOLUTION: DIRECT EVIDENCE FOR A PH INDUCED CONFORMATIONAL TRANSITION IN THE REACTIVE SITE==
-
The line below this paragraph, containing "STRUCTURE_1atb", creates the "Structure Box" on the page.
+
<StructureSection load='1atb' size='340' side='right'caption='[[1atb]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1atb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ascaris_suum Ascaris suum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ATB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ATB FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1atb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1atb OCA], [https://pdbe.org/1atb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1atb RCSB], [https://www.ebi.ac.uk/pdbsum/1atb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1atb ProSAT]</span></td></tr>
-
{{STRUCTURE_1atb| PDB=1atb | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ITR1_ASCSU ITR1_ASCSU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/at/1atb_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1atb ConSurf].
 +
<div style="clear:both"></div>
-
===HIGH-RESOLUTION STRUCTURE OF ASCARIS TRYPSIN INHIBITOR IN SOLUTION: DIRECT EVIDENCE FOR A PH INDUCED CONFORMATIONAL TRANSITION IN THE REACTIVE SITE===
+
==See Also==
-
 
+
*[[Trypsin inhibitor 3D structures|Trypsin inhibitor 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_7922043}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 7922043 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_7922043}}
+
-
 
+
-
==About this Structure==
+
-
1ATB is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Ascaris_suum Ascaris suum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ATB OCA].
+
-
 
+
-
==Reference==
+
-
High-resolution structure of Ascaris trypsin inhibitor in solution: direct evidence for a pH-induced conformational transition in the reactive site., Grasberger BL, Clore GM, Gronenborn AM, Structure. 1994 Jul 15;2(7):669-78. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/7922043 7922043]
+
[[Category: Ascaris suum]]
[[Category: Ascaris suum]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Clore, G M.]]
+
[[Category: Clore GM]]
-
[[Category: Grasberger, B L.]]
+
[[Category: Grasberger BL]]
-
[[Category: Gronenborn, A M.]]
+
[[Category: Gronenborn AM]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 17:33:21 2008''
+

Current revision

HIGH-RESOLUTION STRUCTURE OF ASCARIS TRYPSIN INHIBITOR IN SOLUTION: DIRECT EVIDENCE FOR A PH INDUCED CONFORMATIONAL TRANSITION IN THE REACTIVE SITE

PDB ID 1atb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1atb"
Personal tools