This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1bh4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:32, 13 March 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1bh4.png|left|200px]]
 
-
<!--
+
==CIRCULIN A FROM CHASSALIA PARVIFLORA, NMR, 12 STRUCTURES==
-
The line below this paragraph, containing "STRUCTURE_1bh4", creates the "Structure Box" on the page.
+
<StructureSection load='1bh4' size='340' side='right'caption='[[1bh4]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1bh4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Chassalia_parviflora Chassalia parviflora]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BH4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BH4 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PRD_000752:CIRCULIN+A'>PRD_000752</scene></td></tr>
-
{{STRUCTURE_1bh4| PDB=1bh4 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bh4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bh4 OCA], [https://pdbe.org/1bh4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bh4 RCSB], [https://www.ebi.ac.uk/pdbsum/1bh4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bh4 ProSAT]</span></td></tr>
-
 
+
</table>
-
===CIRCULIN A FROM CHASSALIA PARVIFLORA, NMR, 12 STRUCTURES===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/CIRA_CHAPA CIRA_CHAPA] Probably participates in a plant defense mechanism. Has antibiotic activity. Inhibits the cytopathic effects and replication of the human immunodeficiency virus. Active against the Gram-positive S.aureus with a minimum inhibition concentration of approximately 0.2 microM. Relatively ineffective against Gram-negative bacteria such as E.coli and P.aeruginosa.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_9878410}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 9878410 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bh/1bh4_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_9878410}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1BH4 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Chassalia_parviflora Chassalia parviflora]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BH4 OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bh4 ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:9878410</ref><references group="xtra"/>
+
</StructureSection>
[[Category: Chassalia parviflora]]
[[Category: Chassalia parviflora]]
-
[[Category: Craik, D J.]]
+
[[Category: Large Structures]]
-
[[Category: Daly, N L.]]
+
[[Category: Craik DJ]]
-
[[Category: Koltay, A.]]
+
[[Category: Daly NL]]
-
[[Category: Anti-hiv activity]]
+
[[Category: Koltay A]]
-
[[Category: Cyclic peptide]]
+
-
[[Category: Cystine knot]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 08:40:38 2009''
+

Current revision

CIRCULIN A FROM CHASSALIA PARVIFLORA, NMR, 12 STRUCTURES

PDB ID 1bh4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1bh4"
Personal tools