This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1bng

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:34, 13 March 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1bng.png|left|200px]]
 
-
<!--
+
==BARNASE S85C/H102C DISULFIDE MUTANT==
-
The line below this paragraph, containing "STRUCTURE_1bng", creates the "Structure Box" on the page.
+
<StructureSection load='1bng' size='340' side='right'caption='[[1bng]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1bng]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_amyloliquefaciens Bacillus amyloliquefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BNG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BNG FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bng OCA], [https://pdbe.org/1bng PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bng RCSB], [https://www.ebi.ac.uk/pdbsum/1bng PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bng ProSAT]</span></td></tr>
-
{{STRUCTURE_1bng| PDB=1bng | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RNBR_BACAM RNBR_BACAM] Hydrolyzes phosphodiester bonds in RNA, poly- and oligoribonucleotides resulting in 3'-nucleoside monophosphates via 2',3'-cyclophosphate intermediates.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bn/1bng_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bng ConSurf].
 +
<div style="clear:both"></div>
-
===BARNASE S85C/H102C DISULFIDE MUTANT===
+
==See Also==
-
 
+
*[[Barnase 3D structures|Barnase 3D structures]]
-
 
+
*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
-
<!--
+
__TOC__
-
The line below this paragraph, {{ABSTRACT_PUBMED_7473729}}, adds the Publication Abstract to the page
+
</StructureSection>
-
(as it appears on PubMed at http://www.pubmed.gov), where 7473729 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_7473729}}
+
-
 
+
-
==About this Structure==
+
-
1BNG is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacillus_amyloliquefaciens Bacillus amyloliquefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BNG OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:7473729</ref><references group="xtra"/>
+
[[Category: Bacillus amyloliquefaciens]]
[[Category: Bacillus amyloliquefaciens]]
-
[[Category: Clarke, J.]]
+
[[Category: Large Structures]]
-
[[Category: Fersht, A R.]]
+
[[Category: Clarke J]]
-
[[Category: Henrick, K.]]
+
[[Category: Fersht AR]]
-
[[Category: Endonuclease]]
+
[[Category: Henrick K]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 08:42:50 2009''
+

Current revision

BARNASE S85C/H102C DISULFIDE MUTANT

PDB ID 1bng

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools