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1btc
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="1btc" size="450" color="white" frame="true" align="right" spinBox="true" caption="1btc, resolution 2.0Å" /> '''THREE-DIMENSIONAL STR...) |
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| - | [[Image:1btc.gif|left|200px]]<br /><applet load="1btc" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1btc, resolution 2.0Å" /> | ||
| - | '''THREE-DIMENSIONAL STRUCTURE OF SOYBEAN BETA-AMYLASE DETERMINED AT 3.0 ANGSTROMS RESOLUTION: PRELIMINARY CHAIN TRACING OF THE COMPLEX WITH ALPHA-CYCLODEXTRIN'''<br /> | ||
| - | == | + | ==THREE-DIMENSIONAL STRUCTURE OF SOYBEAN BETA-AMYLASE DETERMINED AT 3.0 ANGSTROMS RESOLUTION: PRELIMINARY CHAIN TRACING OF THE COMPLEX WITH ALPHA-CYCLODEXTRIN== |
| - | + | <StructureSection load='1btc' size='340' side='right'caption='[[1btc]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[1btc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BTC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BTC FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900015:alpha-cyclodextrin'>PRD_900015</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1btc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1btc OCA], [https://pdbe.org/1btc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1btc RCSB], [https://www.ebi.ac.uk/pdbsum/1btc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1btc ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/AMYB_SOYBN AMYB_SOYBN] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bt/1btc_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1btc ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | == | + | ==See Also== |
| - | + | *[[Amylase 3D structures|Amylase 3D structures]] | |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Glycine max]] | |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Hehre EJ]] |
| - | [[Category: Hehre | + | [[Category: Hirose M]] |
| - | [[Category: Hirose | + | [[Category: Katsube Y]] |
| - | [[Category: Katsube | + | [[Category: Mikami B]] |
| - | [[Category: Mikami | + | [[Category: Morita Y]] |
| - | [[Category: Morita | + | [[Category: Sacchettini JC]] |
| - | [[Category: Sacchettini | + | [[Category: Sato M]] |
| - | [[Category: Sato | + | |
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Current revision
THREE-DIMENSIONAL STRUCTURE OF SOYBEAN BETA-AMYLASE DETERMINED AT 3.0 ANGSTROMS RESOLUTION: PRELIMINARY CHAIN TRACING OF THE COMPLEX WITH ALPHA-CYCLODEXTRIN
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Categories: Glycine max | Large Structures | Hehre EJ | Hirose M | Katsube Y | Mikami B | Morita Y | Sacchettini JC | Sato M
