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1by2

From Proteopedia

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{{Seed}}
 
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[[Image:1by2.png|left|200px]]
 
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==STRUCTURE OF M2BP SCAVENGER RECEPTOR CYSTEINE-RICH DOMAIN==
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The line below this paragraph, containing "STRUCTURE_1by2", creates the "Structure Box" on the page.
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<StructureSection load='1by2' size='340' side='right'caption='[[1by2]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1by2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BY2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BY2 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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{{STRUCTURE_1by2| PDB=1by2 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1by2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1by2 OCA], [https://pdbe.org/1by2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1by2 RCSB], [https://www.ebi.ac.uk/pdbsum/1by2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1by2 ProSAT]</span></td></tr>
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</table>
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===STRUCTURE OF M2BP SCAVENGER RECEPTOR CYSTEINE-RICH DOMAIN===
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== Function ==
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[https://www.uniprot.org/uniprot/LG3BP_HUMAN LG3BP_HUMAN] Promotes intergrin-mediated cell adhesion. May stimulate host defense against viruses and tumor cells.<ref>PMID:8034587</ref> <ref>PMID:11146440</ref> <ref>PMID:9501082</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_10074941}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 10074941 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/by/1by2_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_10074941}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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1BY2 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BY2 OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1by2 ConSurf].
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<div style="clear:both"></div>
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==Reference==
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== References ==
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<ref group="xtra">PMID:10074941</ref><references group="xtra"/>
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<references/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Hohenester, E.]]
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[[Category: Large Structures]]
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[[Category: Sasaki, T.]]
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[[Category: Hohenester E]]
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[[Category: Timpl, R.]]
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[[Category: Sasaki T]]
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[[Category: Extracellular matrix]]
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[[Category: Timpl R]]
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[[Category: Extracellular module]]
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[[Category: Glycosylated protein]]
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[[Category: Scavenger receptor]]
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[[Category: Tumour-associated antigen]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 14:16:20 2009''
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Current revision

STRUCTURE OF M2BP SCAVENGER RECEPTOR CYSTEINE-RICH DOMAIN

PDB ID 1by2

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