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1d2q

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(New page: 200px<br /> <applet load="1d2q" size="450" color="white" frame="true" align="right" spinBox="true" caption="1d2q, resolution 2.8&Aring;" /> '''CRYSTAL STRUCTURE OF...)
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[[Image:1d2q.gif|left|200px]]<br />
 
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<applet load="1d2q" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1d2q, resolution 2.8&Aring;" />
 
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'''CRYSTAL STRUCTURE OF HUMAN TRAIL'''<br />
 
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==Overview==
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==CRYSTAL STRUCTURE OF HUMAN TRAIL==
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TRAIL is a newly identified cytokine belonging to the large tumor necrosis, factor (TNF) family. TRAIL is a novel molecule inducing apoptosis in a, wide variety of tumor cells but not in normal cells. To help in, elucidating its biological roles and designing mutants with improved, therapeutic potential, we have determined the crystal structure of human, TRAIL. The structure reveals that a unique frame insertion of 12-16 amino, acids adopts a salient loop structure penetrating into the, receptor-binding site. The loop drastically alters the common, receptor-binding surface of the TNF family most likely for the specific, recognition of cognate partners. A structure-based mutagenesis study, demonstrates a critical role of the insertion loop in the cytotoxic, activity of TRAIL.
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<StructureSection load='1d2q' size='340' side='right'caption='[[1d2q]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1d2q]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D2Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D2Q FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d2q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d2q OCA], [https://pdbe.org/1d2q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d2q RCSB], [https://www.ebi.ac.uk/pdbsum/1d2q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d2q ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/TNF10_HUMAN TNF10_HUMAN] Cytokine that binds to TNFRSF10A/TRAILR1, TNFRSF10B/TRAILR2, TNFRSF10C/TRAILR3, TNFRSF10D/TRAILR4 and possibly also to TNFRSF11B/OPG. Induces apoptosis. Its activity may be modulated by binding to the decoy receptors TNFRSF10C/TRAILR3, TNFRSF10D/TRAILR4 and TNFRSF11B/OPG that cannot induce apoptosis.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d2/1d2q_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1d2q ConSurf].
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<div style="clear:both"></div>
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==Disease==
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==See Also==
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Known disease associated with this structure: Squamous cell carcinoma, head and neck OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=603612 603612]]
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*[[TRAIL|TRAIL]]
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__TOC__
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==About this Structure==
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</StructureSection>
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1D2Q is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1D2Q OCA].
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==Reference==
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2.8 A resolution crystal structure of human TRAIL, a cytokine with selective antitumor activity., Cha SS, Kim MS, Choi YH, Sung BJ, Shin NK, Shin HC, Sung YC, Oh BH, Immunity. 1999 Aug;11(2):253-61. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=10485660 10485660]
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Cha, S.S.]]
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[[Category: Cha S-S]]
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[[Category: cytokine]]
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[[Category: trail]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 12 16:27:55 2007''
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Current revision

CRYSTAL STRUCTURE OF HUMAN TRAIL

PDB ID 1d2q

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