This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1d7f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1d7f" [edit=sysop:move=sysop])
Current revision (15:46, 13 March 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1d7f.png|left|200px]]
 
-
{{STRUCTURE_1d7f| PDB=1d7f | SCENE= }}
+
==CRYSTAL STRUCTURE OF ASPARAGINE 233-REPLACED CYCLODEXTRIN GLUCANOTRANSFERASE FROM ALKALOPHILIC BACILLUS SP. 1011 DETERMINED AT 1.9 A RESOLUTION==
-
 
+
<StructureSection load='1d7f' size='340' side='right'caption='[[1d7f]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
===CRYSTAL STRUCTURE OF ASPARAGINE 233-REPLACED CYCLODEXTRIN GLUCANOTRANSFERASE FROM ALKALOPHILIC BACILLUS SP. 1011 DETERMINED AT 1.9 A RESOLUTION===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1d7f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._1011 Bacillus sp. 1011]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D7F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D7F FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_10679895}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d7f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d7f OCA], [https://pdbe.org/1d7f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d7f RCSB], [https://www.ebi.ac.uk/pdbsum/1d7f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d7f ProSAT]</span></td></tr>
-
[[1d7f]] is a 2 chain structure of [[Glycosyltransferase]] with sequence from [http://en.wikipedia.org/wiki/Bacillus_sp. Bacillus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D7F OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CDGT_BACS0 CDGT_BACS0]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d7/1d7f_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1d7f ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Glycosyltransferase|Glycosyltransferase]]
+
*[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:010679895</ref><references group="xtra"/>
+
[[Category: Bacillus sp. 1011]]
-
[[Category: Bacillus sp.]]
+
[[Category: Large Structures]]
-
[[Category: Cyclomaltodextrin glucanotransferase]]
+
[[Category: Haga K]]
-
[[Category: Haga, K.]]
+
[[Category: Harata K]]
-
[[Category: Harata, K.]]
+
[[Category: Ishii N]]
-
[[Category: Ishii, N.]]
+
[[Category: Yamane K]]
-
[[Category: Yamane, K.]]
+
-
[[Category: Cgtase]]
+
-
[[Category: Cyclodextrin glucanotransferase]]
+
-
[[Category: Transferase]]
+

Current revision

CRYSTAL STRUCTURE OF ASPARAGINE 233-REPLACED CYCLODEXTRIN GLUCANOTRANSFERASE FROM ALKALOPHILIC BACILLUS SP. 1011 DETERMINED AT 1.9 A RESOLUTION

PDB ID 1d7f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools