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8syb
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 8syb is ON HOLD Authors: Kroft, C.W., Thoden, J.B., Holden, H.M. Description: X-ray crystal structure of UDP-2,3-diacetamido-2,3-dideoxy-glucuronic...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==X-ray crystal structure of UDP-2,3-diacetamido-2,3-dideoxy-glucuronic acid-2-epimerase from Thermus thermophilus strain HB27, D98N variant in the presence of UDP-2,3-diacetamido-2,3-dideoxy-glucuronic acid and UDP-N-acetylglucosamine at pH 9== | |
| - | + | <StructureSection load='8syb' size='340' side='right'caption='[[8syb]], [[Resolution|resolution]] 2.20Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[8syb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB27 Thermus thermophilus HB27]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8SYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8SYB FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> | |
| - | [[Category: | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MJL:(2~{S},3~{S},4~{R},5~{R},6~{R})-4,5-diacetamido-6-[[[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3-oxidanyl-oxane-2-carboxylic+acid'>MJL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=UD1:URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE'>UD1</scene></td></tr> |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8syb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8syb OCA], [https://pdbe.org/8syb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8syb RCSB], [https://www.ebi.ac.uk/pdbsum/8syb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8syb ProSAT]</span></td></tr> |
| - | [[Category: Holden | + | </table> |
| - | [[Category: Kroft | + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q72KY0_THET2 Q72KY0_THET2] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Thermus thermophilus HB27]] | ||
| + | [[Category: Holden HM]] | ||
| + | [[Category: Kroft CW]] | ||
| + | [[Category: Thoden JB]] | ||
Current revision
X-ray crystal structure of UDP-2,3-diacetamido-2,3-dideoxy-glucuronic acid-2-epimerase from Thermus thermophilus strain HB27, D98N variant in the presence of UDP-2,3-diacetamido-2,3-dideoxy-glucuronic acid and UDP-N-acetylglucosamine at pH 9
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