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8w6x
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 8w6x is ON HOLD Authors: Hiromoto, T., Tamada, T. Description: Neutron structure of [NiFe]-hydrogenase from D. vulgaris Miyazaki F in its oxidized ...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Neutron structure of [NiFe]-hydrogenase from D. vulgaris Miyazaki F in its oxidized state== | |
| - | + | <StructureSection load='8w6x' size='340' side='right'caption='[[8w6x]], [[Resolution|resolution]] 1.04Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[8w6x]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._'Miyazaki_F' Desulfovibrio vulgaris str. 'Miyazaki F']. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=7yw6 7yw6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8W6X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8W6X FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Hybrid , Neutron Diffraction , X-ray diffraction, [[Resolution|Resolution]] 1.04Å</td></tr> | |
| - | [[Category: | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=NFU:FORMYL[BIS(HYDROCYANATO-1KAPPAC)]IRONNICKEL(FE-NI)'>NFU</scene>, <scene name='pdbligand=OH:HYDROXIDE+ION'>OH</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr> |
| - | [[Category: Hiromoto | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8w6x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8w6x OCA], [https://pdbe.org/8w6x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8w6x RCSB], [https://www.ebi.ac.uk/pdbsum/8w6x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8w6x ProSAT]</span></td></tr> |
| - | [[Category: Tamada | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/PHNL_DESVM PHNL_DESVM] Catalyzes the reversible oxidoreduction of molecular hydrogen, in conjunction with a specific electron acceptor, cytochrome c3. | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Desulfovibrio vulgaris str. 'Miyazaki F']] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Hiromoto T]] | ||
| + | [[Category: Tamada T]] | ||
Current revision
Neutron structure of [NiFe]-hydrogenase from D. vulgaris Miyazaki F in its oxidized state
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