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1r12

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[[Image:1r12.jpg|left|200px]]
[[Image:1r12.jpg|left|200px]]
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{{Structure
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<!--
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|PDB= 1r12 |SIZE=350|CAPTION= <scene name='initialview01'>1r12</scene>, resolution 1.7&Aring;
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The line below this paragraph, containing "STRUCTURE_1r12", creates the "Structure Box" on the page.
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|SITE=
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|LIGAND=
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/NAD(+)_nucleosidase NAD(+) nucleosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.5 3.2.2.5] </span>
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{{STRUCTURE_1r12| PDB=1r12 | SCENE= }}
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|RELATEDENTRY=[[1r0s|1R0S]], [[1r15|1R15]], [[1r16|1R16]], [[1lbe|1LBE]], [[1ism|1ISM]], [[1isj|1ISJ]], [[1isi|1ISI]], [[1ish|1ISH]], [[1isg|1ISG]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1r12 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1r12 OCA], [http://www.ebi.ac.uk/pdbsum/1r12 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1r12 RCSB]</span>
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'''Native Aplysia ADP ribosyl cyclase'''
'''Native Aplysia ADP ribosyl cyclase'''
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ADP-ribosyl cyclase; crystal structures reveal a covalent intermediate., Love ML, Szebenyi DM, Kriksunov IA, Thiel DJ, Munshi C, Graeff R, Lee HC, Hao Q, Structure. 2004 Mar;12(3):477-86. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15016363 15016363]
ADP-ribosyl cyclase; crystal structures reveal a covalent intermediate., Love ML, Szebenyi DM, Kriksunov IA, Thiel DJ, Munshi C, Graeff R, Lee HC, Hao Q, Structure. 2004 Mar;12(3):477-86. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15016363 15016363]
[[Category: Aplysia californica]]
[[Category: Aplysia californica]]
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[[Category: NAD(+) nucleosidase]]
 
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Graeff, R.]]
[[Category: Graeff, R.]]
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[[Category: Szebenyi, D M.E.]]
[[Category: Szebenyi, D M.E.]]
[[Category: Thiel, D J.]]
[[Category: Thiel, D J.]]
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[[Category: adp-ribosyl cyclase]]
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[[Category: Adp-ribosyl cyclase]]
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[[Category: ca2+ signalling]]
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[[Category: Ca2+ signalling]]
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[[Category: cyclic adp-ribose]]
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[[Category: Cyclic adp-ribose]]
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[[Category: naadp]]
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[[Category: Naadp]]
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[[Category: x-ray crystallography]]
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[[Category: X-ray crystallography]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 06:56:42 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:21:44 2008''
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Revision as of 03:56, 3 May 2008

Template:STRUCTURE 1r12

Native Aplysia ADP ribosyl cyclase


Overview

ADP-ribosyl cyclase catalyzes the elimination of nicotinamide from NAD and cyclization to cADPR, a known second messenger in cellular calcium signaling pathways. We have determined to 2.0 A resolution the structure of Aplysia cyclase with ribose-5-phosphate bound covalently at C3' and with the base exchange substrate (BES), pyridylcarbinol, bound to the active site. In addition, further refinement at 2.4 A resolution of the structure of nicotinamide-bound cyclase, which was previously reported, reveals that ribose-5-phosphate is also covalently bound in this structure, and a second nicotinamide site was identified. The structures of native and mutant Glu179Ala cyclase were also solved to 1.7 and 2.0 A respectively. It is proposed that the second nicotinamide site serves to promote cyclization by clearing the active site of the nicotinamide byproduct. Moreover, a ribosylation mechanism can be proposed in which the cyclization reaction proceeds through a covalently bound intermediate.

About this Structure

1R12 is a Single protein structure of sequence from Aplysia californica. Full crystallographic information is available from OCA.

Reference

ADP-ribosyl cyclase; crystal structures reveal a covalent intermediate., Love ML, Szebenyi DM, Kriksunov IA, Thiel DJ, Munshi C, Graeff R, Lee HC, Hao Q, Structure. 2004 Mar;12(3):477-86. PMID:15016363 Page seeded by OCA on Sat May 3 06:56:42 2008

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