This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3r1b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:06, 14 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3r1b.png|left|200px]]
 
-
{{STRUCTURE_3r1b| PDB=3r1b | SCENE= }}
+
==Open crystal structure of cytochrome P450 2B4 covalently bound to the mechanism-based inactivator tert-butylphenylacetylene==
-
 
+
<StructureSection load='3r1b' size='340' side='right'caption='[[3r1b]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-
===Open crystal structure of cytochrome P450 2B4 covalently bound to the mechanism-based inactivator tert-butylphenylacetylene===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3r1b]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R1B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R1B FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_21510666}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CM5:5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE'>CM5</scene>, <scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PRD_900003:sucrose'>PRD_900003</scene>, <scene name='pdbligand=TB2:(4-TERT-BUTYLPHENYL)ACETALDEHYDE'>TB2</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r1b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r1b OCA], [https://pdbe.org/3r1b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r1b RCSB], [https://www.ebi.ac.uk/pdbsum/3r1b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r1b ProSAT]</span></td></tr>
-
[[3r1b]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R1B OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CP2B4_RABIT CP2B4_RABIT] Cytochromes P450 are a group of heme-thiolate monooxygenases. In liver microsomes, this enzyme is involved in an NADPH-dependent electron transport pathway. It oxidizes a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics. In the epoxidation of arachidonic acid it has a unique preference for the 5,6-olefin.
==See Also==
==See Also==
-
*[[Cytochrome P450|Cytochrome P450]]
+
*[[Cytochrome P450 3D structures|Cytochrome P450 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:021510666</ref><ref group="xtra">PMID:016373351</ref><ref group="xtra">PMID:015100217</ref><ref group="xtra">PMID:014563924</ref><ref group="xtra">PMID:017887776</ref><ref group="xtra">PMID:019397311</ref><ref group="xtra">PMID:020815363</ref><ref group="xtra">PMID:020880847</ref><references group="xtra"/>
+
[[Category: Large Structures]]
[[Category: Oryctolagus cuniculus]]
[[Category: Oryctolagus cuniculus]]
-
[[Category: Unspecific monooxygenase]]
+
[[Category: Gay SC]]
-
[[Category: Gay, S C.]]
+
[[Category: Halpert JR]]
-
[[Category: Halpert, J R.]]
+
[[Category: Hollenberg PF]]
-
[[Category: Hollenberg, P F.]]
+
[[Category: Stout CD]]
-
[[Category: Stout, C D.]]
+
[[Category: Zhang H]]
-
[[Category: Zhang, H.]]
+
-
[[Category: Cytochrome p450 2b4]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Monooxygenase]]
+
-
[[Category: Oxidoreductase-oxidoreductase inhibitor complex]]
+

Current revision

Open crystal structure of cytochrome P450 2B4 covalently bound to the mechanism-based inactivator tert-butylphenylacetylene

PDB ID 3r1b

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools