This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3r5y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 3r5y is ON HOLD Authors: Cellitti, S.E., Shaffer, J., Jones, D.H., Mukherjee, T., Gurumurthy, M., Bursulaya, B., Boshoff, H.I.M., Choi, I., Nayya, A...)
Current revision (12:11, 14 March 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3r5y is ON HOLD
+
==Structure of a Deazaflavin-dependent nitroreductase from Nocardia farcinica, with co-factor F420==
-
 
+
<StructureSection load='3r5y' size='340' side='right'caption='[[3r5y]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
Authors: Cellitti, S.E., Shaffer, J., Jones, D.H., Mukherjee, T., Gurumurthy, M., Bursulaya, B., Boshoff, H.I.M., Choi, I., Nayya, A., Lee, Y.S., Cherian, J., Niyomrattanakit, P., Dick, T., Manjunatha, U.H., Barry, C.E., Spraggon, G., Geierstanger, B.H.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3r5y]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Nocardia_farcinica Nocardia farcinica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R5Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R5Y FirstGlance]. <br>
-
Description: Structure of a Deazaflavin-dependent nitroreductase from Nocardia farcinica, with co-factor F420
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.801&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=F42:COENZYME+F420'>F42</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r5y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r5y OCA], [https://pdbe.org/3r5y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r5y RCSB], [https://www.ebi.ac.uk/pdbsum/3r5y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r5y ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5YUF0_NOCFA Q5YUF0_NOCFA]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Nocardia farcinica]]
 +
[[Category: Barry CE]]
 +
[[Category: Boshoff HIM]]
 +
[[Category: Bursulaya B]]
 +
[[Category: Cellitti SE]]
 +
[[Category: Cherian J]]
 +
[[Category: Choi I]]
 +
[[Category: Dick T]]
 +
[[Category: Geierstanger BH]]
 +
[[Category: Gurumurthy M]]
 +
[[Category: Jones DH]]
 +
[[Category: Lee YS]]
 +
[[Category: Manjunatha UH]]
 +
[[Category: Mukherjee T]]
 +
[[Category: Nayya A]]
 +
[[Category: Niyomrattanakit P]]
 +
[[Category: Shaffer J]]
 +
[[Category: Spraggon G]]

Current revision

Structure of a Deazaflavin-dependent nitroreductase from Nocardia farcinica, with co-factor F420

PDB ID 3r5y

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools