This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3rch

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:18, 14 March 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3rch.png|left|200px]]
 
-
<!--
+
==Crystal structure of Human aromatic L-amino acid decarboxylase (AADC) in the open conformation with LLP and PLP bound to Chain-A and Chain-B respectively==
-
The line below this paragraph, containing "STRUCTURE_3rch", creates the "Structure Box" on the page.
+
<StructureSection load='3rch' size='340' side='right'caption='[[3rch]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3rch]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RCH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RCH FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
-
{{STRUCTURE_3rch| PDB=3rch | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rch FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rch OCA], [https://pdbe.org/3rch PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rch RCSB], [https://www.ebi.ac.uk/pdbsum/3rch PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rch ProSAT]</span></td></tr>
 +
</table>
 +
== Disease ==
 +
[https://www.uniprot.org/uniprot/DDC_HUMAN DDC_HUMAN] Aromatic L-amino acid decarboxylase deficiency. The disease is caused by mutations affecting the gene represented in this entry.
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/DDC_HUMAN DDC_HUMAN] Catalyzes the decarboxylation of L-3,4-dihydroxyphenylalanine (DOPA) to dopamine, L-5-hydroxytryptophan to serotonin and L-tryptophan to tryptamine.
-
===Crystal structure of Human aromatic L-amino acid decarboxylase (AADC) in the open conformation with LLP and PLP bound to Chain-A and Chain-B respectively===
+
==See Also==
-
 
+
*[[DOPA decarboxylase|DOPA decarboxylase]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
[[3rch]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RCH OCA].
+
-
[[Category: Aromatic-L-amino-acid decarboxylase]]
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Cellini, B.]]
+
[[Category: Large Structures]]
-
[[Category: Cutruzzola, F.]]
+
[[Category: Borri Voltattorni C]]
-
[[Category: Gianni, S.]]
+
[[Category: Cellini B]]
-
[[Category: Giardina, G.]]
+
[[Category: Cutruzzola F]]
-
[[Category: Montioli, R.]]
+
[[Category: Gianni S]]
-
[[Category: Paiardini, A.]]
+
[[Category: Giardina G]]
-
[[Category: Voltattorni, C Borri.]]
+
[[Category: Montioli R]]
-
[[Category: Aadc deficiency]]
+
[[Category: Paiardini A]]
-
[[Category: Apo enzyme]]
+
-
[[Category: Apo form]]
+
-
[[Category: Conformational change]]
+
-
[[Category: Ddc]]
+
-
[[Category: Decarboxylase]]
+
-
[[Category: Exposed]]
+
-
[[Category: Internal aldimine]]
+
-
[[Category: L-dopa]]
+
-
[[Category: Llp]]
+
-
[[Category: Lyase]]
+
-
[[Category: Open conformation]]
+
-
[[Category: Open dimer]]
+
-
[[Category: Parkinson]]
+
-
[[Category: Plp]]
+
-
[[Category: Shiff base]]
+

Current revision

Crystal structure of Human aromatic L-amino acid decarboxylase (AADC) in the open conformation with LLP and PLP bound to Chain-A and Chain-B respectively

PDB ID 3rch

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools