This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3rfn
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3rfn is ON HOLD Authors: Azoitei, M.L., Ban, Y.A., Julien, J.P., Bryson, S., Schroeter, A., Kalyuzhniy, O., Porter, J.R., Baker, D., Szabo, E., Pai,...) |
|||
| (9 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Epitope backbone grafting by computational design for improved presentation of linear epitopes on scaffold proteins== | |
| - | + | <StructureSection load='3rfn' size='340' side='right'caption='[[3rfn]], [[Resolution|resolution]] 1.80Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3rfn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RFN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RFN FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rfn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rfn OCA], [https://pdbe.org/3rfn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rfn RCSB], [https://www.ebi.ac.uk/pdbsum/3rfn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rfn ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/ALAXS_PYRHO ALAXS_PYRHO] Functions in trans to edit the amino acid moiety from mischarged charged Ser-tRNA(Ala). Has little activity against Gly-tRNA(Ala). | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Pyrococcus horikoshii OT3]] | ||
| + | [[Category: Adachi Y]] | ||
| + | [[Category: Azoitei ML]] | ||
| + | [[Category: Baker D]] | ||
| + | [[Category: Ban YA]] | ||
| + | [[Category: Bryson S]] | ||
| + | [[Category: Julien JP]] | ||
| + | [[Category: Kalyuzhniy O]] | ||
| + | [[Category: Pai EF]] | ||
| + | [[Category: Porter JR]] | ||
| + | [[Category: Schief WR]] | ||
| + | [[Category: Schroeter A]] | ||
| + | [[Category: Szabo E]] | ||
Current revision
Epitope backbone grafting by computational design for improved presentation of linear epitopes on scaffold proteins
| |||||||||||
Categories: Large Structures | Pyrococcus horikoshii OT3 | Adachi Y | Azoitei ML | Baker D | Ban YA | Bryson S | Julien JP | Kalyuzhniy O | Pai EF | Porter JR | Schief WR | Schroeter A | Szabo E
