This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3sf6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:55, 14 March 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of Glutaryl-CoA dehydrogenase from Mycobacterium smegmatis==
==Crystal structure of Glutaryl-CoA dehydrogenase from Mycobacterium smegmatis==
-
<StructureSection load='3sf6' size='340' side='right' caption='[[3sf6]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
+
<StructureSection load='3sf6' size='340' side='right'caption='[[3sf6]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3sf6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycobacterium_smegmatis Mycobacterium smegmatis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SF6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SF6 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3sf6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycolicibacterium_smegmatis_MC2_155 Mycolicibacterium smegmatis MC2 155]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SF6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SF6 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FDA:DIHYDROFLAVINE-ADENINE+DINUCLEOTIDE'>FDA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MSMEG_2466 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1772 Mycobacterium smegmatis])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FDA:DIHYDROFLAVINE-ADENINE+DINUCLEOTIDE'>FDA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutaryl-CoA_dehydrogenase Glutaryl-CoA dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.99.7 1.3.99.7] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sf6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sf6 OCA], [https://pdbe.org/3sf6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sf6 RCSB], [https://www.ebi.ac.uk/pdbsum/3sf6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sf6 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3sf6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sf6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3sf6 RCSB], [http://www.ebi.ac.uk/pdbsum/3sf6 PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0QV68_MYCS2 A0QV68_MYCS2]
 +
 +
==See Also==
 +
*[[Acyl-CoA dehydrogenase 3D structures|Acyl-CoA dehydrogenase 3D structures]]
 +
*[[Glutaryl-CoA dehydrogenase|Glutaryl-CoA dehydrogenase]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Glutaryl-CoA dehydrogenase]]
+
[[Category: Large Structures]]
-
[[Category: Mycobacterium smegmatis]]
+
[[Category: Mycolicibacterium smegmatis MC2 155]]
-
[[Category: Structural genomic]]
+
-
[[Category: Emerald biostructure]]
+
-
[[Category: Niaid]]
+
-
[[Category: Nih]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Sbri]]
+
-
[[Category: Ssgcid]]
+
-
[[Category: Uw]]
+

Current revision

Crystal structure of Glutaryl-CoA dehydrogenase from Mycobacterium smegmatis

PDB ID 3sf6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools