This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3swg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:09, 14 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3swg.jpg|left|200px]]
 
-
<!--
+
==AQUIFEX AEOLICUS MurA in complex with UDP-N-acetylmuramic acid and covalent adduct of PEP with Cys124==
-
The line below this paragraph, containing "STRUCTURE_3swg", creates the "Structure Box" on the page.
+
<StructureSection load='3swg' size='340' side='right'caption='[[3swg]], [[Resolution|resolution]] 1.81&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3swg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SWG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SWG FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.81&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=EPZ:(2R)-2-{[(2R,3R,4R,5S,6R)-3-(ACETYLAMINO)-2-{[(S)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-5-HYDROXY-6-(HYDROXYMETHYL)TETRAHYDRO-2H-PYRAN-4-YL]OXY}PROPANOIC+ACID'>EPZ</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=QPA:S-[(1S)-1-CARBOXY-1-(PHOSPHONOOXY)ETHYL]-L-CYSTEINE'>QPA</scene></td></tr>
-
{{STRUCTURE_3swg| PDB=3swg | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3swg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3swg OCA], [https://pdbe.org/3swg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3swg RCSB], [https://www.ebi.ac.uk/pdbsum/3swg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3swg ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MURA_AQUAE MURA_AQUAE] Cell wall formation. Adds enolpyruvyl to UDP-N-acetylglucosamine (By similarity).
-
===AQUIFEX AEOLICUS MurA in complex with UDP-N-acetylmuramic acid and covalent adduct of PEP with Cys124===
+
==See Also==
-
 
+
*[[Enoylpyruvate transferase 3D structures|Enoylpyruvate transferase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_22378791}}, adds the Publication Abstract to the page
+
[[Category: Aquifex aeolicus VF5]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 22378791 is the PubMed ID number.
+
[[Category: Large Structures]]
-
-->
+
[[Category: Schonbrunn E]]
-
{{ABSTRACT_PUBMED_22378791}}
+
[[Category: Zhu J-Y]]
-
 
+
-
==About this Structure==
+
-
[[3swg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SWG OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:022378791</ref><references group="xtra"/>
+
-
[[Category: Aquifex aeolicus]]
+
-
[[Category: UDP-N-acetylglucosamine 1-carboxyvinyltransferase]]
+
-
[[Category: Schonbrunn, E.]]
+
-
[[Category: Zhu, J Y.]]
+
-
[[Category: Biogenesis/degradation]]
+
-
[[Category: Cell wall]]
+
-
[[Category: Close enzyme state]]
+
-
[[Category: Mura]]
+
-
[[Category: Peptidoglycan synthesis]]
+
-
[[Category: Transferase]]
+

Current revision

AQUIFEX AEOLICUS MurA in complex with UDP-N-acetylmuramic acid and covalent adduct of PEP with Cys124

PDB ID 3swg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools