This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3t6c
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
==Crystal structure of an enolase from pantoea ananatis (efi target efi-501676) with bound d-gluconate and mg== | ==Crystal structure of an enolase from pantoea ananatis (efi target efi-501676) with bound d-gluconate and mg== | ||
| - | <StructureSection load='3t6c' size='340' side='right' caption='[[3t6c]], [[Resolution|resolution]] 1.60Å' scene=''> | + | <StructureSection load='3t6c' size='340' side='right'caption='[[3t6c]], [[Resolution|resolution]] 1.60Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3t6c]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3t6c]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pantoea_ananatis_LMG_20103 Pantoea ananatis LMG 20103]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3T6C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3T6C FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GCO:GLUCONIC+ACID'>GCO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.598Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GCO:GLUCONIC+ACID'>GCO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3t6c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3t6c OCA], [https://pdbe.org/3t6c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3t6c RCSB], [https://www.ebi.ac.uk/pdbsum/3t6c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3t6c ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/DGD_PANAM DGD_PANAM] Has low D-gluconate dehydratase activity (in vitro), suggesting that it has no significant role in D-gluconate degradation in vivo. Has no detectable activity with a panel of 70 other acid sugars (in vitro).<ref>PMID:24697546</ref> |
| + | |||
| + | ==See Also== | ||
| + | *[[Enolase 3D structures|Enolase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Pantoea ananatis LMG 20103]] |
| - | [[Category: | + | [[Category: Almo SC]] |
| - | [[Category: | + | [[Category: Bhosle R]] |
| - | [[Category: | + | [[Category: Chowdhury S]] |
| - | [[Category: Evans | + | [[Category: Evans B]] |
| - | [[Category: Gerlt | + | [[Category: Gerlt JA]] |
| - | [[Category: | + | [[Category: Hammonds J]] |
| - | [[Category: | + | [[Category: Hillerich B]] |
| - | [[Category: | + | [[Category: Imker HJ]] |
| - | [[Category: | + | [[Category: Morisco LL]] |
| - | [[Category: | + | [[Category: Scott Glenn A]] |
| - | [[Category: Toro | + | [[Category: Toro R]] |
| - | [[Category: Vetting | + | [[Category: Vetting MW]] |
| - | [[Category: Washington | + | [[Category: Washington E]] |
| - | [[Category: Wasserman | + | [[Category: Wasserman SR]] |
| - | [[Category: Zencheck | + | [[Category: Zencheck WD]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of an enolase from pantoea ananatis (efi target efi-501676) with bound d-gluconate and mg
| |||||||||||
Categories: Large Structures | Pantoea ananatis LMG 20103 | Almo SC | Bhosle R | Chowdhury S | Evans B | Gerlt JA | Hammonds J | Hillerich B | Imker HJ | Morisco LL | Scott Glenn A | Toro R | Vetting MW | Washington E | Wasserman SR | Zencheck WD
