This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3uwc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:10, 14 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Structure of an aminotransferase (DegT-DnrJ-EryC1-StrS family) from Coxiella burnetii in complex with PMP==
==Structure of an aminotransferase (DegT-DnrJ-EryC1-StrS family) from Coxiella burnetii in complex with PMP==
-
<StructureSection load='3uwc' size='340' side='right' caption='[[3uwc]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+
<StructureSection load='3uwc' size='340' side='right'caption='[[3uwc]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3uwc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Coxiella_burnetii Coxiella burnetii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UWC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3UWC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3uwc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Coxiella_burnetii Coxiella burnetii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UWC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UWC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PMP:4-DEOXY-4-AMINOPYRIDOXAL-5-PHOSPHATE'>PMP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PMP:4-DEOXY-4-AMINOPYRIDOXAL-5-PHOSPHATE'>PMP</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CBU_0696 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=777 Coxiella burnetii])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3uwc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3uwc OCA], [https://pdbe.org/3uwc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3uwc RCSB], [https://www.ebi.ac.uk/pdbsum/3uwc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3uwc ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3uwc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3uwc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3uwc RCSB], [http://www.ebi.ac.uk/pdbsum/3uwc PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/B5U8Q1_COXBU B5U8Q1_COXBU]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Coxiella burnetii]]
[[Category: Coxiella burnetii]]
-
[[Category: Burshteyn, F]]
+
[[Category: Large Structures]]
-
[[Category: Cassidy, M]]
+
[[Category: Burshteyn F]]
-
[[Category: Cheung, J]]
+
[[Category: Cassidy M]]
-
[[Category: Franklin, M]]
+
[[Category: Cheung J]]
-
[[Category: Gary, E]]
+
[[Category: Franklin M]]
-
[[Category: Love, J]]
+
[[Category: Gary E]]
-
[[Category: Rudolph, M]]
+
[[Category: Love J]]
-
[[Category: Lipopolysaccharide biosynthesis]]
+
[[Category: Rudolph M]]
-
[[Category: Transferase]]
+

Current revision

Structure of an aminotransferase (DegT-DnrJ-EryC1-StrS family) from Coxiella burnetii in complex with PMP

PDB ID 3uwc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools