This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3vcr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:24, 14 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3vcr.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of a putative Kdpg (2-keto-3-deoxy-6-phosphogluconate) aldolase from Oleispira antarctica==
-
The line below this paragraph, containing "STRUCTURE_3vcr", creates the "Structure Box" on the page.
+
<StructureSection load='3vcr' size='340' side='right'caption='[[3vcr]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3vcr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Oleispira_antarctica Oleispira antarctica]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3lab 3lab]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VCR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VCR FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PYR:PYRUVIC+ACID'>PYR</scene></td></tr>
-
{{STRUCTURE_3vcr| PDB=3vcr | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vcr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vcr OCA], [https://pdbe.org/3vcr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vcr RCSB], [https://www.ebi.ac.uk/pdbsum/3vcr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vcr ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/D2YW47_OLEAN D2YW47_OLEAN]
-
===Crystal structure of a putative Kdpg (2-keto-3-deoxy-6-phosphogluconate) aldolase from Oleispira antarctica===
+
==See Also==
-
 
+
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
[[3vcr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Oleispira_antarctica Oleispira antarctica]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3lab 3lab]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VCR OCA].
+
[[Category: Large Structures]]
[[Category: Oleispira antarctica]]
[[Category: Oleispira antarctica]]
-
[[Category: Edwards, A M.]]
+
[[Category: Di Leo R]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Edwards AM]]
-
[[Category: Kagan, O.]]
+
[[Category: Joachimiak A]]
-
[[Category: Leo, R Di.]]
+
[[Category: Kagan O]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Savchenko A]]
-
[[Category: Savchenko, A.]]
+
[[Category: Stogios PJ]]
-
[[Category: Stogios, P J.]]
+
[[Category: Yim V]]
-
[[Category: Yim, V.]]
+
-
[[Category: Aldolase superfamily]]
+
-
[[Category: Alpha/beta protein]]
+
-
[[Category: Class i aldolase]]
+
-
[[Category: Kdpg aldolase domain]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Tim barrel]]
+
-
[[Category: Tim beta/alpha barrel]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of a putative Kdpg (2-keto-3-deoxy-6-phosphogluconate) aldolase from Oleispira antarctica

PDB ID 3vcr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3vcr"
Personal tools