This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4dbm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:30, 14 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4dbm.png|left|200px]]
 
-
<!--
+
==Aplysia californica-AChBP in complex with triazole 18==
-
The line below this paragraph, containing "STRUCTURE_4dbm", creates the "Structure Box" on the page.
+
<StructureSection load='4dbm' size='340' side='right'caption='[[4dbm]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[4dbm]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Aplysia_californica Aplysia californica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DBM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DBM FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0J0:(3-EXO)-8,8-DIMETHYL-3-(4-{[(1-METHYL-2-OXO-1,2-DIHYDROQUINOLIN-4-YL)OXY]METHYL}-1H-1,2,3-TRIAZOL-1-YL)-8-AZONIABICYCLO[3.2.1]OCTANE'>0J0</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
{{STRUCTURE_4dbm| PDB=4dbm | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dbm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dbm OCA], [https://pdbe.org/4dbm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dbm RCSB], [https://www.ebi.ac.uk/pdbsum/4dbm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dbm ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8WSF8_APLCA Q8WSF8_APLCA]
-
===Aplysia californica-AChBP in complex with triazole 18===
+
==See Also==
-
 
+
*[[Acetylcholine binding protein 3D structures|Acetylcholine binding protein 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_22394239}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 22394239 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_22394239}}
+
-
 
+
-
==About this Structure==
+
-
[[4dbm]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Aplysia_californica Aplysia californica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DBM OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:022394239</ref><references group="xtra"/>
+
[[Category: Aplysia californica]]
[[Category: Aplysia californica]]
-
[[Category: Kim, C.]]
+
[[Category: Large Structures]]
-
[[Category: Nemecz, A.]]
+
[[Category: Kim C]]
-
[[Category: Yamauchi, J G.]]
+
[[Category: Nemecz A]]
-
[[Category: Acetylcholine-binding protein]]
+
[[Category: Yamauchi JG]]
-
[[Category: Achbp]]
+
-
[[Category: Cys-loop receptor homologue]]
+
-
[[Category: In situ click-chemistry]]
+
-
[[Category: Nicotinic]]
+
-
[[Category: Quinolinone]]
+
-
[[Category: Triazole]]
+
-
[[Category: Tropane]]
+

Current revision

Aplysia californica-AChBP in complex with triazole 18

PDB ID 4dbm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools