This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4de3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:33, 14 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4de3.jpg|left|200px]]
 
-
<!--
+
==CTX-M-9 class A beta-lactamase complexed with compound 4==
-
The line below this paragraph, containing "STRUCTURE_4de3", creates the "Structure Box" on the page.
+
<StructureSection load='4de3' size='340' side='right'caption='[[4de3]], [[Resolution|resolution]] 1.44&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[4de3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DE3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DE3 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.44&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=DN8:3-BROMO-N-[3-(1H-TETRAZOL-5-YL)PHENYL]BENZAMIDE'>DN8</scene>, <scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
-
{{STRUCTURE_4de3| PDB=4de3 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4de3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4de3 OCA], [https://pdbe.org/4de3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4de3 RCSB], [https://www.ebi.ac.uk/pdbsum/4de3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4de3 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9L5C8_ECOLX Q9L5C8_ECOLX]
-
===CTX-M-9 class A beta-lactamase complexed with compound 4===
+
==See Also==
-
 
+
*[[Beta-lactamase 3D structures|Beta-lactamase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_22296601}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 22296601 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_22296601}}
+
-
 
+
-
==About this Structure==
+
-
[[4de3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DE3 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:022296601</ref><references group="xtra"/>
+
-
[[Category: Beta-lactamase]]
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Chen, Y.]]
+
[[Category: Large Structures]]
-
[[Category: Nichols, D A.]]
+
[[Category: Chen Y]]
-
[[Category: Beta-lactamase]]
+
[[Category: Nichols DA]]
-
[[Category: Ctx-m]]
+
-
[[Category: Fragment]]
+
-
[[Category: Hydrolase-hydrolase inhibitor complex]]
+
-
[[Category: Molecular docking]]
+

Current revision

CTX-M-9 class A beta-lactamase complexed with compound 4

PDB ID 4de3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools