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4dw3
From Proteopedia
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of the glycoprotein Erns from the pestivirus BVDV-1 in complex with 5'-CMP== | |
| - | + | <StructureSection load='4dw3' size='340' side='right'caption='[[4dw3]], [[Resolution|resolution]] 2.35Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[4dw3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bovine_viral_diarrhea_virus_1-CP7 Bovine viral diarrhea virus 1-CP7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DW3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DW3 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35Å</td></tr> | |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=C5P:CYTIDINE-5-MONOPHOSPHATE'>C5P</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dw3 OCA], [https://pdbe.org/4dw3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dw3 RCSB], [https://www.ebi.ac.uk/pdbsum/4dw3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dw3 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/POLG_BVDVC POLG_BVDVC] Initial binding to target cell probably involves interaction of E(rns) with glycosaminoglycans. E1 and/or E2 are responsible of cell attachment with CD46 and subsequent fusion after internalization of the virion by endocytosis (By similarity). P7 forms a leader sequence to properly orient NS2 in the membrane (By similarity). Uncleaved NS2-3 is required for production of infectious virus. NS2 protease seems to play a vital role in viral RNA replication control and in the pathogenicity of the virus. NS3 displays three enzymatic activities: serine protease, NTPase and RNA helicase. NS4A is a cofactor for the NS3 protease activity (By similarity). RNA-directed RNA polymerase NS5 replicates the viral (+) and (-) genome. | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Bovine viral diarrhea virus 1-CP7]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Bontems F]] | ||
| + | [[Category: Bricogne G]] | ||
| + | [[Category: Krey T]] | ||
| + | [[Category: Rey FA]] | ||
| + | [[Category: Ruemenapf T]] | ||
| + | [[Category: Vaney M-C]] | ||
| + | [[Category: Vonrhein C]] | ||
Current revision
Crystal structure of the glycoprotein Erns from the pestivirus BVDV-1 in complex with 5'-CMP
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