This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4f1y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:14, 14 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4f1y.png|left|200px]]
 
-
<!--
+
==CNQX bound to the ligand binding domain of GluA3==
-
The line below this paragraph, containing "STRUCTURE_4f1y", creates the "Structure Box" on the page.
+
<StructureSection load='4f1y' size='340' side='right'caption='[[4f1y]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[4f1y]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4F1Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4F1Y FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.79&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CNI:7-NITRO-2,3-DIOXO-2,3-DIHYDROQUINOXALINE-6-CARBONITRILE'>CNI</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_4f1y| PDB=4f1y | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4f1y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4f1y OCA], [https://pdbe.org/4f1y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4f1y RCSB], [https://www.ebi.ac.uk/pdbsum/4f1y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4f1y ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GRIA3_RAT GRIA3_RAT] Receptor for glutamate that functions as ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. Binding of the excitatory neurotransmitter L-glutamate induces a conformation change, leading to the opening of the cation channel, and thereby converts the chemical signal to an electrical impulse. The receptor then desensitizes rapidly and enters a transient inactive state, characterized by the presence of bound agonist. In the presence of CACNG4 or CACNG7 or CACNG8, shows resensitization which is characterized by a delayed accumulation of current flux upon continued application of glutamate (By similarity).
-
===CNQX bound to the ligand binding domain of GluA3===
+
==See Also==
-
 
+
*[[Glutamate receptor 3D structures|Glutamate receptor 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_22512472}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 22512472 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_22512472}}
+
-
 
+
-
==About this Structure==
+
-
[[4f1y]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4F1Y OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:022512472</ref><references group="xtra"/>
+
[[Category: Rattus norvegicus]]
[[Category: Rattus norvegicus]]
-
[[Category: Ahmed, A H.]]
+
[[Category: Ahmed AH]]
-
[[Category: Oswald, R E.]]
+
[[Category: Oswald RE]]
-
[[Category: Ampa receptor]]
+
-
[[Category: Cnqx]]
+
-
[[Category: Glua3]]
+
-
[[Category: Glur3]]
+
-
[[Category: Glutamate receptor]]
+
-
[[Category: Lbd]]
+
-
[[Category: Neurotransmitter receptor]]
+
-
[[Category: S1s2]]
+
-
[[Category: Transport protein]]
+
-
[[Category: Transport protein-agonist complex]]
+

Current revision

CNQX bound to the ligand binding domain of GluA3

PDB ID 4f1y

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools