This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4gc9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "4gc9" [edit=sysop:move=sysop])
Current revision (15:43, 14 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 4gc9 is ON HOLD
+
==Crystal structure of murine TFB1M in complex with SAM==
-
 
+
<StructureSection load='4gc9' size='340' side='right'caption='[[4gc9]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
Authors: Guja, K.E., Yakubovskaya, E., Shi, H., Mejia, E., Hambardjieva, E., Venkataraman, K., Karzai, A.W., Garcia-Diaz, M.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[4gc9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GC9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4GC9 FirstGlance]. <br>
-
Description: Crystal structure of murine TFB1M in complex with SAM
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.103&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4gc9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gc9 OCA], [https://pdbe.org/4gc9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4gc9 RCSB], [https://www.ebi.ac.uk/pdbsum/4gc9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4gc9 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TFB1M_MOUSE TFB1M_MOUSE] S-adenosyl-L-methionine-dependent methyltransferase which specifically dimethylates mitochondrial 12S rRNA at the conserved stem loop. Also required for basal transcription of mitochondrial DNA, probably via its interaction with POLRMT and TFAM. Stimulates transcription independently of the methyltransferase activity (By similarity).
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Mus musculus]]
 +
[[Category: Garcia-Diaz M]]
 +
[[Category: Guja KE]]
 +
[[Category: Hambardjieva E]]
 +
[[Category: Karzai AW]]
 +
[[Category: Mejia E]]
 +
[[Category: Shi H]]
 +
[[Category: Venkataraman K]]
 +
[[Category: Yakubovskaya E]]

Current revision

Crystal structure of murine TFB1M in complex with SAM

PDB ID 4gc9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools