This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3gd0
From Proteopedia
(Difference between revisions)
| (6 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:3gd0.png|left|200px]] | ||
| - | + | ==Crystal structure of laminaripentaose-producing beta-1,3-glucanase== | |
| - | + | <StructureSection load='3gd0' size='340' side='right'caption='[[3gd0]], [[Resolution|resolution]] 1.62Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3gd0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_matensis Streptomyces matensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GD0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GD0 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.62Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gd0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gd0 OCA], [https://pdbe.org/3gd0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gd0 RCSB], [https://www.ebi.ac.uk/pdbsum/3gd0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gd0 ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/Q9Z4I2_9ACTN Q9Z4I2_9ACTN] | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | < | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gd/3gd0_consurf.spt"</scriptWhenChecked> | |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | + | </jmolCheckbox> | |
| - | == | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gd0 ConSurf]. |
| - | [[3gd0]] is a 1 chain structure with sequence from [ | + | <div style="clear:both"></div> |
| - | + | __TOC__ | |
| - | == | + | </StructureSection> |
| - | < | + | [[Category: Large Structures]] |
| - | [[ | + | |
[[Category: Streptomyces matensis]] | [[Category: Streptomyces matensis]] | ||
| - | [[Category: Hsu | + | [[Category: Hsu MT]] |
| - | [[Category: Lai | + | [[Category: Lai CC]] |
| - | [[Category: Li | + | [[Category: Li YK]] |
| - | [[Category: Liu | + | [[Category: Liu SW]] |
| - | [[Category: Wang | + | [[Category: Wang WC]] |
| - | [[Category: Wu | + | [[Category: Wu HM]] |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of laminaripentaose-producing beta-1,3-glucanase
| |||||||||||
Categories: Large Structures | Streptomyces matensis | Hsu MT | Lai CC | Li YK | Liu SW | Wang WC | Wu HM

