This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3hf3
From Proteopedia
(Difference between revisions)
m (Protected "3hf3" [edit=sysop:move=sysop]) |
|||
| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:3hf3.png|left|200px]] | ||
| - | + | ==Old Yellow Enzyme from Thermus scotoductus SA-01== | |
| + | <StructureSection load='3hf3' size='340' side='right'caption='[[3hf3]], [[Resolution|resolution]] 2.20Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3hf3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_scotoductus Thermus scotoductus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HF3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HF3 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hf3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hf3 OCA], [https://pdbe.org/3hf3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hf3 RCSB], [https://www.ebi.ac.uk/pdbsum/3hf3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hf3 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/B0JDW3_THESC B0JDW3_THESC] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hf/3hf3_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hf3 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | == | + | ==See Also== |
| - | + | *[[NADPH dehydrogenase|NADPH dehydrogenase]] | |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Large Structures]] | |
| - | [[ | + | |
| - | + | ||
| - | + | ||
| - | < | + | |
| - | [[Category: | + | |
[[Category: Thermus scotoductus]] | [[Category: Thermus scotoductus]] | ||
| - | + | [[Category: Isupov MN]] | |
| - | [[Category: Isupov | + | [[Category: Litthauer D]] |
| - | [[Category: Litthauer | + | [[Category: Littlechild JA]] |
| - | [[Category: Littlechild | + | [[Category: Opperman DJ]] |
| - | [[Category: Opperman | + | [[Category: Sewell BT]] |
| - | [[Category: Sewell | + | [[Category: Van Heerden E]] |
| - | [[Category: | + | |
| - | + | ||
Current revision
Old Yellow Enzyme from Thermus scotoductus SA-01
| |||||||||||
