This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3hyt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3hyt" [edit=sysop:move=sysop])
Current revision (08:27, 20 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3hyt| PDB=3hyt | SCENE= }}
 
-
===Structural Basis of GDP Release and Gating in G Protein Coupled Fe2+ Transport===
 
-
{{ABSTRACT_PUBMED_19629046}}
 
-
==About this Structure==
+
==Structural Basis of GDP Release and Gating in G Protein Coupled Fe2+ Transport==
-
[[3hyt]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HYT OCA].
+
<StructureSection load='3hyt' size='340' side='right'caption='[[3hyt]], [[Resolution|resolution]] 2.74&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==Reference==
+
<table><tr><td colspan='2'>[[3hyt]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HYT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HYT FirstGlance]. <br>
-
<ref group="xtra">PMID:019629046</ref><references group="xtra"/>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.74&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AGO:2-AMINO-9-(5-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOAMINO)PHOSPHORYL]OXY}PHOSPHORYL]-3-O-{[2-(METHYLAMINO)PHENYL]CARBONYL}-BETA-D-ERYTHRO-PENTOFURANOSYL-2-ULOSE)-1,9-DIHYDRO-6H-PURIN-6-ONE'>AGO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hyt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hyt OCA], [https://pdbe.org/3hyt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hyt RCSB], [https://www.ebi.ac.uk/pdbsum/3hyt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hyt ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/FEOB_ECOLI FEOB_ECOLI] GTP-driven Fe(2+) uptake system.<ref>PMID:8407793</ref> <ref>PMID:12446835</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hy/3hyt_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hyt ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Jormakka, M.]]
+
[[Category: Large Structures]]
-
[[Category: Maher, M J.]]
+
[[Category: Jormakka M]]
-
[[Category: Cell inner membrane]]
+
[[Category: Maher MJ]]
-
[[Category: Cell membrane]]
+
-
[[Category: G protein]]
+
-
[[Category: Gtp-binding]]
+
-
[[Category: Ion transport]]
+
-
[[Category: Iron]]
+
-
[[Category: Iron transport]]
+
-
[[Category: Membrane]]
+
-
[[Category: Metal transport]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Transmembrane]]
+
-
[[Category: Transport]]
+

Current revision

Structural Basis of GDP Release and Gating in G Protein Coupled Fe2+ Transport

PDB ID 3hyt

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools