This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3krz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:30, 20 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3krz.png|left|200px]]
 
-
<!--
+
==Crystal Structure of the Thermostable NADH4-bound old yellow enzyme from Thermoanaerobacter pseudethanolicus E39==
-
The line below this paragraph, containing "STRUCTURE_3krz", creates the "Structure Box" on the page.
+
<StructureSection load='3krz' size='340' side='right'caption='[[3krz]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3krz]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoanaerobacter_pseudethanolicus_ATCC_33223 Thermoanaerobacter pseudethanolicus ATCC 33223]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KRZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KRZ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=TXD:1,4,5,6-TETRAHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>TXD</scene></td></tr>
-
{{STRUCTURE_3krz| PDB=3krz | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3krz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3krz OCA], [https://pdbe.org/3krz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3krz RCSB], [https://www.ebi.ac.uk/pdbsum/3krz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3krz ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/B0KAH1_THEP3 B0KAH1_THEP3]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kr/3krz_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3krz ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of the Thermostable NADH4-bound old yellow enzyme from Thermoanaerobacter pseudethanolicus E39===
+
==See Also==
-
 
+
*[[NADPH dehydrogenase|NADPH dehydrogenase]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_19943268}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 19943268 is the PubMed ID number.
+
[[Category: Thermoanaerobacter pseudethanolicus ATCC 33223]]
-
-->
+
[[Category: Adalbjornsson BV]]
-
{{ABSTRACT_PUBMED_19943268}}
+
[[Category: Leys D]]
-
 
+
[[Category: Scrutton NS]]
-
==About this Structure==
+
[[Category: Toogood HS]]
-
3KRZ is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Thermoanaerobacter_pseudethanolicus_atcc_33223 Thermoanaerobacter pseudethanolicus atcc 33223]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KRZ OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:19943268</ref><references group="xtra"/>
+
-
[[Category: Thermoanaerobacter pseudethanolicus atcc 33223]]
+
-
[[Category: Adalbjornsson, B V.]]
+
-
[[Category: Leys, D.]]
+
-
[[Category: Scrutton, N S.]]
+
-
[[Category: Toogood, H S.]]
+
-
[[Category: Dimer of dimer]]
+
-
[[Category: Ene-reductase activity]]
+
-
[[Category: Homotetramer]]
+
-
[[Category: Old yellow enzyme]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Thermophilic]]
+
-
[[Category: Tim barrel]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 23 08:37:03 2010''
+

Current revision

Crystal Structure of the Thermostable NADH4-bound old yellow enzyme from Thermoanaerobacter pseudethanolicus E39

PDB ID 3krz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools