This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3lih

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:31, 20 March 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3lih.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of fructosyltransferase (D191A) from A. japonicus in complex with raffinose==
-
The line below this paragraph, containing "STRUCTURE_3lih", creates the "Structure Box" on the page.
+
<StructureSection load='3lih' size='340' side='right'caption='[[3lih]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3lih]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_japonicus Aspergillus japonicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LIH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LIH FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900002:raffinose'>PRD_900002</scene></td></tr>
-
{{STRUCTURE_3lih| PDB=3lih | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lih FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lih OCA], [https://pdbe.org/3lih PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lih RCSB], [https://www.ebi.ac.uk/pdbsum/3lih PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lih ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of fructosyltransferase (D191A) from A. japonicus in complex with raffinose===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q1W3Z7_ASPJA Q1W3Z7_ASPJA]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3LIH is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspergillus_japonicus Aspergillus japonicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LIH OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/li/3lih_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lih ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Aspergillus japonicus]]
[[Category: Aspergillus japonicus]]
-
[[Category: Chen, C J.]]
+
[[Category: Large Structures]]
-
[[Category: Chiang, C M.]]
+
[[Category: Chen CJ]]
-
[[Category: Chuankhayan, P.]]
+
[[Category: Chiang CM]]
-
[[Category: Five bladed beta-propeller fold]]
+
[[Category: Chuankhayan P]]
-
[[Category: Hydrolase]]
+
-
[[Category: Protein-oligosaccharide complex]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 12 11:19:05 2010''
+

Current revision

Crystal structure of fructosyltransferase (D191A) from A. japonicus in complex with raffinose

PDB ID 3lih

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3lih"
Personal tools