This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3shd
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3shd is ON HOLD Authors: Hong, M.K., Kim, J.K., Kang, L.W. Description: Crystal structure of Nudix hydrolase Orf153, ymfB, from Escherichia coli K-...) |
|||
| (7 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of Nudix hydrolase Orf153, ymfB, from Escherichia coli K-1== | |
| - | + | <StructureSection load='3shd' size='340' side='right'caption='[[3shd]], [[Resolution|resolution]] 2.50Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3shd]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_APEC_O1 Escherichia coli APEC O1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SHD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SHD FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> | |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3shd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3shd OCA], [https://pdbe.org/3shd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3shd RCSB], [https://www.ebi.ac.uk/pdbsum/3shd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3shd ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/NUDJ_ECOK1 NUDJ_ECOK1] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Escherichia coli APEC O1]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Hong MK]] | ||
| + | [[Category: Kang LW]] | ||
| + | [[Category: Kim JK]] | ||
Current revision
Crystal structure of Nudix hydrolase Orf153, ymfB, from Escherichia coli K-1
| |||||||||||
