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3v6i

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==Crystal structure of the peripheral stalk of Thermus thermophilus H+-ATPase/synthase at 2.25 A resolution==
==Crystal structure of the peripheral stalk of Thermus thermophilus H+-ATPase/synthase at 2.25 A resolution==
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<StructureSection load='3v6i' size='340' side='right' caption='[[3v6i]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
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<StructureSection load='3v6i' size='340' side='right'caption='[[3v6i]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3v6i]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V6I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3V6I FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3v6i]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V6I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3V6I FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3k5b|3k5b]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">atpE, TTHA1276, vatE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=274 Thermus thermophilus]), TTHA1279 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=274 Thermus thermophilus])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3v6i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v6i OCA], [https://pdbe.org/3v6i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3v6i RCSB], [https://www.ebi.ac.uk/pdbsum/3v6i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3v6i ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3v6i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v6i OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3v6i RCSB], [http://www.ebi.ac.uk/pdbsum/3v6i PDBsum]</span></td></tr>
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</table>
</table>
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<div style="background-color:#fffaf0;">
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== Function ==
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== Publication Abstract from PubMed ==
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[https://www.uniprot.org/uniprot/VATE_THET8 VATE_THET8] Produces ATP from ADP in the presence of a proton gradient across the membrane.
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Rotary ATPases couple ATP hydrolysis/synthesis with proton translocation across biological membranes and so are central components of the biological energy conversion machinery. Their peripheral stalks are essential components that counteract torque generated by rotation of the central stalk during ATP synthesis or hydrolysis. Here we present a 2.25-A resolution crystal structure of the peripheral stalk from Thermus thermophilus A-type ATPase/synthase. We identify bending and twisting motions inherent within the structure that accommodate and complement a radial wobbling of the ATPase headgroup as it progresses through its catalytic cycles, while still retaining azimuthal stiffness necessary to counteract rotation of the central stalk. The conformational freedom of the peripheral stalk is dictated by its unusual right-handed coiled-coil architecture, which is in principle conserved across all rotary ATPases. In context of the intact enzyme, the dynamics of the peripheral stalks provides a potential mechanism for cooperativity between distant parts of rotary ATPases.
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The dynamic stator stalk of rotary ATPases.,Stewart AG, Lee LK, Donohoe M, Chaston JJ, Stock D Nat Commun. 2012 Feb 21;3:687. doi: 10.1038/ncomms1693. PMID:22353718<ref>PMID:22353718</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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==See Also==
==See Also==
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*[[ATPase|ATPase]]
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*[[ATPase 3D structures|ATPase 3D structures]]
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*[[V-ATPase|V-ATPase]]
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== References ==
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<references/>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Thermus thermophilus]]
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[[Category: Large Structures]]
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[[Category: Chaston, J J]]
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[[Category: Thermus thermophilus HB8]]
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[[Category: Donohoe, M]]
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[[Category: Chaston JJ]]
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[[Category: Lee, L K]]
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[[Category: Donohoe M]]
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[[Category: Stewart, A G]]
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[[Category: Lee LK]]
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[[Category: Stock, D]]
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[[Category: Stewart AG]]
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[[Category: Atp binding]]
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[[Category: Stock D]]
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[[Category: Atpase/synthase]]
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[[Category: Hydrolase]]
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[[Category: Membrane]]
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[[Category: Peripheral stator stalk]]
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[[Category: Right handed coiled-coil]]
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Current revision

Crystal structure of the peripheral stalk of Thermus thermophilus H+-ATPase/synthase at 2.25 A resolution

PDB ID 3v6i

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