This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3vny

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:41, 20 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of beta-glucuronidase from Acidobacterium capsulatum==
==Crystal structure of beta-glucuronidase from Acidobacterium capsulatum==
-
<StructureSection load='3vny' size='340' side='right' caption='[[3vny]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+
<StructureSection load='3vny' size='340' side='right'caption='[[3vny]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3vny]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Acidobacterium_capsulatum Acidobacterium capsulatum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VNY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VNY FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3vny]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acidobacterium_capsulatum_ATCC_51196 Acidobacterium capsulatum ATCC 51196]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VNY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VNY FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene><br>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3vnz|3vnz]], [[3vo0|3vo0]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ACP_2665 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=33075 Acidobacterium capsulatum])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vny FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vny OCA], [https://pdbe.org/3vny PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vny RCSB], [https://www.ebi.ac.uk/pdbsum/3vny PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vny ProSAT]</span></td></tr>
-
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-glucuronidase Beta-glucuronidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.31 3.2.1.31] </span></td></tr>
+
</table>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vny FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vny OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vny RCSB], [http://www.ebi.ac.uk/pdbsum/3vny PDBsum]</span></td></tr>
+
== Function ==
-
<table>
+
[https://www.uniprot.org/uniprot/C1F2K5_ACIC5 C1F2K5_ACIC5]
 +
 
 +
==See Also==
 +
*[[Glucuronisidase 3D structures|Glucuronisidase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Acidobacterium capsulatum]]
+
[[Category: Acidobacterium capsulatum ATCC 51196]]
-
[[Category: Beta-glucuronidase]]
+
[[Category: Large Structures]]
-
[[Category: Biely, P.]]
+
[[Category: Biely P]]
-
[[Category: Fujimoto, Z.]]
+
[[Category: Fujimoto Z]]
-
[[Category: Ichinose, H.]]
+
[[Category: Ichinose H]]
-
[[Category: Kaneko, S.]]
+
[[Category: Kaneko S]]
-
[[Category: Kotake, Y.]]
+
[[Category: Kotake Y]]
-
[[Category: Michikawa, M.]]
+
[[Category: Michikawa M]]
-
[[Category: Momma, M.]]
+
[[Category: Momma M]]
-
[[Category: Tsumuraya, Y.]]
+
[[Category: Tsumuraya Y]]
-
[[Category: Yoshida, M.]]
+
[[Category: Yoshida M]]
-
[[Category: Glycoside hydrolase family 79]]
+
-
[[Category: Greek-key]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Tim barrel]]
+

Current revision

Crystal structure of beta-glucuronidase from Acidobacterium capsulatum

PDB ID 3vny

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools