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3w5m
From Proteopedia
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| - | {{STRUCTURE_3w5m| PDB=3w5m | SCENE= }} | ||
| - | ===Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase=== | ||
| - | {{ABSTRACT_PUBMED_23486481}} | ||
| - | == | + | ==Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase== |
| - | [[3w5m]] is a 1 chain structure with sequence from [ | + | <StructureSection load='3w5m' size='340' side='right'caption='[[3w5m]], [[Resolution|resolution]] 1.80Å' scene=''> |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[3w5m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_avermitilis_MA-4680_=_NBRC_14893 Streptomyces avermitilis MA-4680 = NBRC 14893]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W5M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3W5M FirstGlance]. <br> |
| - | < | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
| - | [ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3w5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w5m OCA], [https://pdbe.org/3w5m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3w5m RCSB], [https://www.ebi.ac.uk/pdbsum/3w5m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3w5m ProSAT]</span></td></tr> |
| - | [ | + | </table> |
| - | + | == Function == | |
| - | [ | + | [https://www.uniprot.org/uniprot/RHA78_STRAW RHA78_STRAW] Alpha-L-rhamnosidase which is able to degrade p-nitrophenyl-alpha-L-rhamnopyranoside (PNP-Rha) in vitro. Releases L-rhamnose from citrus flavonoids such as naringin, rutin and hesperidin, and the arabinogalactan-protein (AGP) gum arabic. AGPs are a family of proteoglycans that are localized on the cell surfaces of higher plants. Cleaves both the alpha-1,6 and the alpha-1,2-linked rhamnosyl residues.<ref>PMID:23291751</ref> |
| - | [ | + | == References == |
| - | [[Category: | + | <references/> |
| - | [[Category: | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Streptomyces avermitilis MA-4680 = NBRC 14893]] |
| - | [[Category: | + | [[Category: Fujimoto Z]] |
| - | [[Category: | + | [[Category: Gilbert HJ]] |
| - | [[Category: | + | [[Category: Henrissat BF]] |
| - | [[Category: | + | [[Category: Jackson A]] |
| - | [[Category: | + | [[Category: Kaneko S]] |
| + | [[Category: Maehara T]] | ||
| + | [[Category: Michikawa M]] | ||
| + | [[Category: Momma M]] | ||
Current revision
Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase
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