This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4xbs

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:02, 20 March 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='4xbs' size='340' side='right'caption='[[4xbs]], [[Resolution|resolution]] 2.17&Aring;' scene=''>
<StructureSection load='4xbs' size='340' side='right'caption='[[4xbs]], [[Resolution|resolution]] 2.17&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4xbs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_brevis_atcc_14869 Lactobacillus brevis atcc 14869]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XBS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4XBS FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4xbs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Levilactobacillus_brevis_ATCC_14869_=_DSM_20054 Levilactobacillus brevis ATCC 14869 = DSM 20054]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XBS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XBS FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">deoC, HMPREF0495_01319 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=649758 Lactobacillus brevis ATCC 14869])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.17&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Deoxyribose-phosphate_aldolase Deoxyribose-phosphate aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.4 4.1.2.4] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xbs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xbs OCA], [https://pdbe.org/4xbs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xbs RCSB], [https://www.ebi.ac.uk/pdbsum/4xbs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xbs ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4xbs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xbs OCA], [http://pdbe.org/4xbs PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4xbs RCSB], [http://www.ebi.ac.uk/pdbsum/4xbs PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4xbs ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/U2PI02_LACBR U2PI02_LACBR]] Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.[HAMAP-Rule:MF_00114][SAAS:SAAS00678635]
+
[https://www.uniprot.org/uniprot/U2PI02_LEVBR U2PI02_LEVBR] Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.[HAMAP-Rule:MF_00114]
==See Also==
==See Also==
Line 15: Line 14:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Deoxyribose-phosphate aldolase]]
 
-
[[Category: Lactobacillus brevis atcc 14869]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Chen, Q]]
+
[[Category: Levilactobacillus brevis ATCC 14869 = DSM 20054]]
-
[[Category: Jiao, X C]]
+
[[Category: Chen Q]]
-
[[Category: Kong, X D]]
+
[[Category: Jiao X-C]]
-
[[Category: Pan, J]]
+
[[Category: Kong X-D]]
-
[[Category: Xu, G C]]
+
[[Category: Pan J]]
-
[[Category: Xu, J H]]
+
[[Category: Xu G-C]]
-
[[Category: Zhang, Z J]]
+
[[Category: Xu J-H]]
-
[[Category: Aldolase]]
+
[[Category: Zhang Z-J]]
-
[[Category: Lyase]]
+

Current revision

2-deoxyribose-5-phosphate aldolase mutant - E78K

PDB ID 4xbs

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools