This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5ci9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:08, 20 March 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of human Tob in complex with inhibitor fragment 6==
==Crystal structure of human Tob in complex with inhibitor fragment 6==
-
<StructureSection load='5ci9' size='340' side='right' caption='[[5ci9]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+
<StructureSection load='5ci9' size='340' side='right'caption='[[5ci9]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5ci9]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CI9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5CI9 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5ci9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CI9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5CI9 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=549:1-(PROPAN-2-YL)-1H-BENZIMIDAZOLE-5-CARBOXYLIC+ACID'>549</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ci8|5ci8]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=549:1-(PROPAN-2-YL)-1H-BENZIMIDAZOLE-5-CARBOXYLIC+ACID'>549</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ci9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ci9 OCA], [http://pdbe.org/5ci9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ci9 RCSB], [http://www.ebi.ac.uk/pdbsum/5ci9 PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ci9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ci9 OCA], [https://pdbe.org/5ci9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ci9 RCSB], [https://www.ebi.ac.uk/pdbsum/5ci9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ci9 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/TOB1_HUMAN TOB1_HUMAN]] Anti-proliferative protein that interacts with the erbB-2 receptor tyrosine kinase. May physically and/or functionally interact with protein-tyrosine kinase receptors.
+
[https://www.uniprot.org/uniprot/TOB1_HUMAN TOB1_HUMAN] Anti-proliferative protein that interacts with the erbB-2 receptor tyrosine kinase. May physically and/or functionally interact with protein-tyrosine kinase receptors.
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bai, Y]]
+
[[Category: Homo sapiens]]
-
[[Category: Bartlam, M]]
+
[[Category: Large Structures]]
-
[[Category: Nagatoishi, S]]
+
[[Category: Bai Y]]
-
[[Category: Suzuki, T]]
+
[[Category: Bartlam M]]
-
[[Category: Tashiro, S]]
+
[[Category: Nagatoishi S]]
-
[[Category: Tsumoto, K]]
+
[[Category: Suzuki T]]
-
[[Category: Yamamoto, T]]
+
[[Category: Tashiro S]]
-
[[Category: Tob/btg family]]
+
[[Category: Tsumoto K]]
-
[[Category: Transcription-inhibitor complex]]
+
[[Category: Yamamoto T]]

Current revision

Crystal structure of human Tob in complex with inhibitor fragment 6

PDB ID 5ci9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools