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1dkk

From Proteopedia

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{{Seed}}
 
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[[Image:1dkk.png|left|200px]]
 
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<!--
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==BOBWHITE QUAIL LYSOZYME WITH NITRATE==
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The line below this paragraph, containing "STRUCTURE_1dkk", creates the "Structure Box" on the page.
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<StructureSection load='1dkk' size='340' side='right'caption='[[1dkk]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1dkk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Colinus_virginianus Colinus virginianus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DKK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DKK FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
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{{STRUCTURE_1dkk| PDB=1dkk | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dkk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dkk OCA], [https://pdbe.org/1dkk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dkk RCSB], [https://www.ebi.ac.uk/pdbsum/1dkk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dkk ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/LYSC_COLVI LYSC_COLVI] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dk/1dkk_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dkk ConSurf].
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<div style="clear:both"></div>
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===BOBWHITE QUAIL LYSOZYME WITH NITRATE===
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==See Also==
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*[[Lysozyme 3D structures|Lysozyme 3D structures]]
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__TOC__
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<!--
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_8880929}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 8880929 is the PubMed ID number.
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{{ABSTRACT_PUBMED_8880929}}
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==About this Structure==
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1DKK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Colinus_virginianus Colinus virginianus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DKK OCA].
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==Reference==
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Refined structures of bobwhite quail lysozyme uncomplexed and complexed with the HyHEL-5 Fab fragment., Chacko S, Silverton EW, Smith-Gill SJ, Davies DR, Shick KA, Xavier KA, Willson RC, Jeffrey PD, Chang CY, Sieker LC, Sheriff S, Proteins. 1996 Sep;26(1):55-65. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8880929 8880929]
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[[Category: Colinus virginianus]]
[[Category: Colinus virginianus]]
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[[Category: Lysozyme]]
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[[Category: Large Structures]]
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[[Category: Single protein]]
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[[Category: Jeffrey PD]]
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[[Category: Jeffrey, P D.]]
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[[Category: Sheriff S]]
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[[Category: Sheriff, S.]]
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[[Category: Bacteriolytic enzyme]]
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[[Category: Glycosidase]]
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[[Category: Hydrolase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 23:12:46 2008''
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Current revision

BOBWHITE QUAIL LYSOZYME WITH NITRATE

PDB ID 1dkk

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