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1dnl

From Proteopedia

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[[Image:1dnl.png|left|200px]]
 
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{{STRUCTURE_1dnl| PDB=1dnl | SCENE= }}
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==X-RAY STRUCTURE OF ESCHERICHIA COLI PYRIDOXINE 5'-PHOSPHATE OXIDASE COMPLEXED WITH FMN AT 1.8 ANGSTROM RESOLUTION==
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<StructureSection load='1dnl' size='340' side='right'caption='[[1dnl]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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===X-RAY STRUCTURE OF ESCHERICHIA COLI PYRIDOXINE 5'-PHOSPHATE OXIDASE COMPLEXED WITH FMN AT 1.8 ANGSTROM RESOLUTION===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1dnl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DNL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DNL FirstGlance]. <br>
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{{ABSTRACT_PUBMED_10903950}}
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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==About this Structure==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dnl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dnl OCA], [https://pdbe.org/1dnl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dnl RCSB], [https://www.ebi.ac.uk/pdbsum/1dnl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dnl ProSAT]</span></td></tr>
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[[1dnl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DNL OCA].
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PDXH_ECOLI PDXH_ECOLI] Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).[HAMAP-Rule:MF_01629]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dn/1dnl_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dnl ConSurf].
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<div style="clear:both"></div>
==See Also==
==See Also==
*[[Pyridoxine 5'-phosphate oxidase|Pyridoxine 5'-phosphate oxidase]]
*[[Pyridoxine 5'-phosphate oxidase|Pyridoxine 5'-phosphate oxidase]]
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__TOC__
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==Reference==
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</StructureSection>
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<ref group="xtra">PMID:010903950</ref><references group="xtra"/>
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[[Category: Escherichia coli K-12]]
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[[Category: Escherichia coli k-12]]
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[[Category: Large Structures]]
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[[Category: Pyridoxal 5'-phosphate synthase]]
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[[Category: Abraham DJ]]
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[[Category: Abraham, D J.]]
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[[Category: Mathews I]]
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[[Category: Mathews, I.]]
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[[Category: Musayev FN]]
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[[Category: Musayev, F N.]]
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[[Category: Safo MK]]
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[[Category: Safo, M K.]]
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[[Category: Schirch V]]
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[[Category: Salvo, M L.di.]]
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[[Category: Thiel DJ]]
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[[Category: Schirch, V.]]
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[[Category: Di Salvo ML]]
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[[Category: Thiel, D J.]]
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[[Category: Beta barrel]]
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[[Category: Oxidoreductase]]
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[[Category: Protein-fmn complex]]
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Current revision

X-RAY STRUCTURE OF ESCHERICHIA COLI PYRIDOXINE 5'-PHOSPHATE OXIDASE COMPLEXED WITH FMN AT 1.8 ANGSTROM RESOLUTION

PDB ID 1dnl

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