This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1dqd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:52, 20 March 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1dqd.png|left|200px]]
 
-
<!--
+
==CRYSTAL STRUCTURE OF FAB HGR-2 F6, A COMPETITIVE ANTAGONIST OF THE GLUCAGON RECEPTOR==
-
The line below this paragraph, containing "STRUCTURE_1dqd", creates the "Structure Box" on the page.
+
<StructureSection load='1dqd' size='340' side='right'caption='[[1dqd]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1dqd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DQD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DQD FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dqd OCA], [https://pdbe.org/1dqd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dqd RCSB], [https://www.ebi.ac.uk/pdbsum/1dqd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dqd ProSAT]</span></td></tr>
-
{{STRUCTURE_1dqd| PDB=1dqd | SCENE= }}
+
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dq/1dqd_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dqd ConSurf].
 +
<div style="clear:both"></div>
-
===CRYSTAL STRUCTURE OF FAB HGR-2 F6, A COMPETITIVE ANTAGONIST OF THE GLUCAGON RECEPTOR===
+
==See Also==
-
 
+
*[[Antibody 3D structures|Antibody 3D structures]]
-
 
+
*[[Sandbox 20009|Sandbox 20009]]
-
<!--
+
*[[3D structures of non-human antibody|3D structures of non-human antibody]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_10771426}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 10771426 is the PubMed ID number.
+
</StructureSection>
-
-->
+
[[Category: Large Structures]]
-
{{ABSTRACT_PUBMED_10771426}}
+
-
 
+
-
==About this Structure==
+
-
1DQD is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DQD OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:10771426</ref><references group="xtra"/>
+
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Brzozowski, A M.]]
+
[[Category: Brzozowski AM]]
-
[[Category: Bywater, R P.]]
+
[[Category: Bywater RP]]
-
[[Category: Hubbard, R E.]]
+
[[Category: Hubbard RE]]
-
[[Category: Pike, A C.W.]]
+
[[Category: Pike ACW]]
-
[[Category: Roberts, S M.]]
+
[[Category: Roberts SM]]
-
[[Category: Skovgaard, R N.]]
+
[[Category: Skovgaard RN]]
-
[[Category: Svendsen, I.]]
+
[[Category: Svendsen I]]
-
[[Category: Vissing, H.]]
+
[[Category: Vissing H]]
-
[[Category: Wright, L M.]]
+
[[Category: Wright LM]]
-
[[Category: Antigen binding site]]
+
-
[[Category: Complementarity-determining region]]
+
-
[[Category: Fab]]
+
-
[[Category: Glucagon receptor]]
+
-
[[Category: Heavy chain]]
+
-
[[Category: Light chain]]
+
-
[[Category: Monoclonal antibody]]
+
-
[[Category: Receptor antagonist]]
+
-
[[Category: Typical immunoglobulin fold]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 05:17:14 2009''
+

Current revision

CRYSTAL STRUCTURE OF FAB HGR-2 F6, A COMPETITIVE ANTAGONIST OF THE GLUCAGON RECEPTOR

PDB ID 1dqd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools